{
    "type": "genome",
    "identifier": "GCA_938039345.1",
    "organism": "uncultured Sediminicola sp.",
    "title": "uncultured Sediminicola sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "marine college, shandong university",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938039345.1",
        "bioproject": "PRJEB50838",
        "biosample": "SAMEA14074022",
        "wgs_master": "CALHVB000000000.1",
        "refseq_category": "na",
        "taxid": "879246",
        "species_taxid": "879246",
        "organism_name": "uncultured Sediminicola sp.",
        "infraspecific_name": "",
        "isolate": "R3_Bin_Bin_45_1",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/25",
        "asm_name": "R3_Bin_Bin_45_1",
        "submitter": "marine college, shandong university",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/039/345/GCA_938039345.1_R3_Bin_Bin_45_1",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-25",
    "dateModified": "2023-01-25",
    "datePublished": "2023-01-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Sediminicola sp."
        ],
        "sample_taxid": [
            "879246"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.486 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 60.19,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1744524",
        "Number of Sequences": "170",
        "Longest Sequences (bp)": "52187",
        "N50 (bp)": "14073",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.2",
        "Number of CDSs": "1463",
        "Average Protein Length": "315.5",
        "Coding Ratio (%)": "79.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "11",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_003634105.1",
                "taxid": 1206816,
                "species_taxid": 1206816,
                "relation_to_type": "type",
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                "ani": 78.0316,
                "matched_fragments": 219,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulophaga fucicola",
                "strain": "strain=DSM 24786",
                "accession": "GCA_900119145.1",
                "taxid": 76595,
                "species_taxid": 76595,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 204,
                "total_fragments": 504,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulophaga omnivescoria",
                "strain": "strain=W5C",
                "accession": "GCA_001999725.1",
                "taxid": 1888890,
                "species_taxid": 1888890,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.604,
                "matched_fragments": 194,
                "total_fragments": 504,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulophaga lytica",
                "strain": "strain=DSM 7489",
                "accession": "GCA_000190595.1",
                "taxid": 979,
                "species_taxid": 979,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.397,
                "matched_fragments": 194,
                "total_fragments": 504,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulophaga algicola",
                "strain": "strain=DSM 14237",
                "accession": "GCA_000186265.1",
                "taxid": 59600,
                "species_taxid": 59600,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.282,
                "matched_fragments": 164,
                "total_fragments": 504,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Maribacter aquivivus",
                "strain": "strain=DSM 16478",
                "accession": "GCA_900142175.1",
                "taxid": 228958,
                "species_taxid": 228958,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2456,
                "matched_fragments": 122,
                "total_fragments": 504,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Maribacter ulvicola",
                "strain": "strain=DSM 15366",
                "accession": "GCA_900155985.1",
                "taxid": 228959,
                "species_taxid": 228959,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0591,
                "matched_fragments": 108,
                "total_fragments": 504,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Joostella marina",
                "strain": "strain=DSM 19592",
                "accession": "GCA_000260115.1",
                "taxid": 453852,
                "species_taxid": 453852,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.491,
                "matched_fragments": 82,
                "total_fragments": 504,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenibacter catalasegens",
                "strain": "strain=P308H10",
                "accession": "GCA_002909235.1",
                "taxid": 2056779,
                "species_taxid": 2056779,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3086,
                "matched_fragments": 67,
                "total_fragments": 504,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 60.19,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_002813425.1",
                "gtdb_species": "s__Cellulophaga sp002813425",
                "ani": 78.1368,
                "matched_fragments": 187,
                "total_fragments": 504,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003634105.1",
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                "matched_fragments": 219,
                "total_fragments": 504,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900119145.1",
                "gtdb_species": "s__Cellulophaga fucicola",
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                "matched_fragments": 205,
                "total_fragments": 504,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001999725.1",
                "gtdb_species": "s__Cellulophaga omnivescoria",
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                "total_fragments": 504,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016744255.1",
                "gtdb_species": "s__Maribacter_B sp016744255",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_000186265.1",
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                "mean_intra_species_ani": "98.35",
                "min_intra_species_ani": "98.34",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCF_900142175.1",
                "gtdb_species": "s__Maribacter aquivivus",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000799565.1",
                "gtdb_species": "s__Cellulophaga sp000799565",
                "ani": 76.5076,
                "matched_fragments": 124,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_005144745.1",
                "gtdb_species": "s__Croceivirga sp005144745",
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                "matched_fragments": 98,
                "total_fragments": 504,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Croceivirga",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.80",
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                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.302,
        "cell_length": 0.477,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": 20.0,
        "optimum_ph": 7.0,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__CANLOV01",
        "s__CANLOV01 sp938039345"
    ],
    "_genome_taxon": [
        "uncultured",
        "Sediminicola",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__CANLOV01",
        "s__CANLOV01 sp938039345",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Flavobacteriaceae",
        "CANLOV01",
        "CANLOV01",
        "sp938039345"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        },
        {
            "id": "MEO_0000419",
            "label": "plant body associated"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}