{
    "type": "genome",
    "identifier": "GCA_938039975.1",
    "organism": "uncultured Candidatus Saccharibacteria bacterium",
    "title": "uncultured Candidatus Saccharibacteria bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938039975.1",
        "bioproject": "PRJEB51075",
        "biosample": "SAMEA14084953",
        "wgs_master": "CALHTM000000000.1",
        "refseq_category": "na",
        "taxid": "179883",
        "species_taxid": "179883",
        "organism_name": "uncultured Candidatus Saccharibacteria bacterium",
        "infraspecific_name": "",
        "isolate": "ERR589708_bin.73_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/09",
        "asm_name": "ERR589708_bin.73_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/039/975/GCA_938039975.1_ERR589708_bin.73_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-09",
    "dateModified": "2023-01-09",
    "datePublished": "2023-01-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Candidatus Saccharibacteria bacterium"
        ],
        "sample_taxid": [
            "179883"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.257 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 83.33,
        "contamination": 5.21,
        "strain_heterogeneity": 25.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "893895",
        "Number of Sequences": "25",
        "Longest Sequences (bp)": "148031",
        "N50 (bp)": "43452",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "47.5",
        "Number of CDSs": "872",
        "Average Protein Length": "300.1",
        "Coding Ratio (%)": "87.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 83.33,
            "contamination": 5.21,
            "strain_heterogeneity": 25.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_905372275.1",
                "gtdb_species": "s__Saccharimonas sp905372275",
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                "matched_fragments": 232,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905371595.1",
                "gtdb_species": "s__Saccharimonas sp905371595",
                "ani": 94.8163,
                "matched_fragments": 221,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015257605.1",
                "gtdb_species": "s__Saccharimonas sp015257605",
                "ani": 94.6908,
                "matched_fragments": 172,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.21",
                "min_intra_species_ani": "95.21",
                "mean_intra_species_af": "0.72",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013333625.2",
                "gtdb_species": "s__Saccharimonas sp013333625",
                "ani": 94.6487,
                "matched_fragments": 203,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905365145.1",
                "gtdb_species": "s__Saccharimonas sp905365145",
                "ani": 94.6282,
                "matched_fragments": 247,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013333845.2",
                "gtdb_species": "s__Saccharimonas sp013333845",
                "ani": 94.5973,
                "matched_fragments": 202,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013333795.2",
                "gtdb_species": "s__Saccharimonas sp013333795",
                "ani": 94.4575,
                "matched_fragments": 184,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.51",
                "min_intra_species_ani": "97.51",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_905372095.1",
                "gtdb_species": "s__Saccharimonas sp905372095",
                "ani": 94.4276,
                "matched_fragments": 240,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.37",
                "min_intra_species_ani": "95.31",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_010202645.1",
                "gtdb_species": "s__Nanosynbacter sp010202645",
                "ani": 81.2959,
                "matched_fragments": 78,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Nanosynbacteraceae;g__Nanosynbacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.37",
                "min_intra_species_ani": "98.37",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013099015.1",
                "gtdb_species": "s__Nanosynbacter sp013099015",
                "ani": 81.119,
                "matched_fragments": 71,
                "total_fragments": 287,
                "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales;f__Nanosynbacteraceae;g__Nanosynbacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Patescibacteria",
        "c__Saccharimonadia",
        "o__Saccharimonadales",
        "f__Saccharimonadaceae",
        "g__Saccharimonas",
        "s__Saccharimonas sp938039975"
    ],
    "_genome_taxon": [
        "uncultured",
        "Candidatus",
        "Saccharibacteria",
        "bacterium",
        "d__Bacteria",
        "p__Patescibacteria",
        "c__Saccharimonadia",
        "o__Saccharimonadales",
        "f__Saccharimonadaceae",
        "g__Saccharimonas",
        "s__Saccharimonas sp938039975",
        "Bacteria",
        "Patescibacteria",
        "Saccharimonadia",
        "Saccharimonadales",
        "Saccharimonadaceae",
        "Saccharimonas",
        "Saccharimonas",
        "sp938039975"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}