{
    "type": "genome",
    "identifier": "GCA_938041055.1",
    "organism": "Anaerotignum lactatifermentans",
    "title": "Anaerotignum lactatifermentans",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938041055.1",
        "bioproject": "PRJEB51075",
        "biosample": "SAMEA14085248",
        "wgs_master": "CALHYR000000000.1",
        "refseq_category": "na",
        "taxid": "160404",
        "species_taxid": "160404",
        "organism_name": "Anaerotignum lactatifermentans",
        "infraspecific_name": "",
        "isolate": "ERR912035_bin.15_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/10",
        "asm_name": "ERR912035_bin.15_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/041/055/GCA_938041055.1_ERR912035_bin.15_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-10",
    "dateModified": "2023-01-10",
    "datePublished": "2023-01-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerotignum lactatifermentans"
        ],
        "sample_taxid": [
            "160404"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.748 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2643636",
        "Number of Sequences": "95",
        "Longest Sequences (bp)": "130251",
        "N50 (bp)": "53342",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.3",
        "Number of CDSs": "2598",
        "Average Protein Length": "296.0",
        "Coding Ratio (%)": "87.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Anaerotignum lactatifermentans",
                "strain": "strain=DSM 14214",
                "accession": "GCA_900142265.1",
                "taxid": 160404,
                "species_taxid": 160404,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 97.7745,
                "matched_fragments": 730,
                "total_fragments": 839,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Anaerotignum faecicola",
                "strain": "strain=KCTC 15736",
                "accession": "GCA_003865035.1",
                "taxid": 2358141,
                "species_taxid": 2358141,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8777,
                "matched_fragments": 184,
                "total_fragments": 839,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotignum propionicum",
                "strain": "strain=X2",
                "accession": "GCA_001561955.1",
                "taxid": 28446,
                "species_taxid": 28446,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4223,
                "matched_fragments": 100,
                "total_fragments": 839,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotignum propionicum",
                "strain": "strain=DSM 1682",
                "accession": "GCA_900129165.1",
                "taxid": 28446,
                "species_taxid": 28446,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3353,
                "matched_fragments": 97,
                "total_fragments": 839,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotignum neopropionicum",
                "strain": "strain=DSM-3847",
                "accession": "GCA_001571775.1",
                "taxid": 36847,
                "species_taxid": 36847,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1967,
                "matched_fragments": 99,
                "total_fragments": 839,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_900142265.1",
                "gtdb_species": "s__Anaerotignum lactatifermentans",
                "ani": 97.7745,
                "matched_fragments": 730,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.69",
                "min_intra_species_ani": "96.94",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 7,
                "status": "conclusive"
            },
            {
                "accession": "GCA_905212195.1",
                "gtdb_species": "s__Anaerotignum sp905212195",
                "ani": 94.7259,
                "matched_fragments": 618,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001304995.1",
                "gtdb_species": "s__Anaerotignum sp001304995",
                "ani": 92.6044,
                "matched_fragments": 715,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.57",
                "min_intra_species_ani": "97.74",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCF_016902535.1",
                "gtdb_species": "s__Anaerotignum lactatifermentans_A",
                "ani": 80.6439,
                "matched_fragments": 355,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_004557645.1",
                "gtdb_species": "s__Anaerotignum sp004557645",
                "ani": 79.856,
                "matched_fragments": 236,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017483025.1",
                "gtdb_species": "s__Anaerotignum sp017483025",
                "ani": 79.8547,
                "matched_fragments": 218,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019115165.1",
                "gtdb_species": "s__Anaerotignum merdipullorum",
                "ani": 79.0502,
                "matched_fragments": 258,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.63",
                "min_intra_species_ani": "99.27",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017560955.1",
                "gtdb_species": "s__Anaerotignum sp017560955",
                "ani": 78.8666,
                "matched_fragments": 132,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905214825.1",
                "gtdb_species": "s__Anaerotignum sp905214825",
                "ani": 78.0991,
                "matched_fragments": 144,
                "total_fragments": 839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.041,
        "cell_length": 0.447,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 41.0,
        "optimum_ph": null,
        "genome_size": 3546077.0,
        "gc_content": 38.9,
        "coding_genes": 2888.0,
        "rRNA16S_genes": 7.0,
        "tRNA_genes": 61.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Anaerotignaceae",
        "g__Anaerotignum",
        "s__Anaerotignum lactatifermentans"
    ],
    "_genome_taxon": [
        "Anaerotignum",
        "lactatifermentans",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Anaerotignaceae",
        "g__Anaerotignum",
        "s__Anaerotignum lactatifermentans",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Anaerotignaceae",
        "Anaerotignum",
        "Anaerotignum",
        "lactatifermentans"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}