{
    "type": "genome",
    "identifier": "GCA_938048485.1",
    "organism": "uncultured Clostridium sp.",
    "title": "uncultured Clostridium sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938048485.1",
        "bioproject": "PRJEB51075",
        "biosample": "SAMEA14084341",
        "wgs_master": "CALIVC000000000.1",
        "refseq_category": "na",
        "taxid": "59620",
        "species_taxid": "59620",
        "organism_name": "uncultured Clostridium sp.",
        "infraspecific_name": "",
        "isolate": "ERR414319_bin.33_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/09",
        "asm_name": "ERR414319_bin.33_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/048/485/GCA_938048485.1_ERR414319_bin.33_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-09",
    "dateModified": "2023-01-09",
    "datePublished": "2023-01-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Clostridium sp."
        ],
        "sample_taxid": [
            "59620"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark"
        ],
        "sample_host_location_id": [],
        "data_size": "0.376 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1378150",
        "Number of Sequences": "27",
        "Longest Sequences (bp)": "274852",
        "N50 (bp)": "88963",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "28.8",
        "Number of CDSs": "1384",
        "Average Protein Length": "291.6",
        "Coding Ratio (%)": "87.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__CAG-273",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.67",
                "min_intra_species_ani": "98.38",
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                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
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                "accession": "GCA_000437855.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__CAG-273",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.80",
                "min_intra_species_ani": "98.79",
                "mean_intra_species_af": "0.86",
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                "num_clustered_genomes": 3,
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__CAG-273",
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                "min_intra_species_ani": "99.19",
                "mean_intra_species_af": "0.68",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_910589185.1",
                "gtdb_species": "s__CAG-273 sp910589185",
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                "total_fragments": 444,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__CAG-273",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900551615.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__CAG-269",
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                "mean_intra_species_ani": "98.20",
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                "mean_intra_species_af": "0.87",
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            },
            {
                "accession": "GCA_905215615.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_900553405.1",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_017479865.1",
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            },
            {
                "accession": "GCA_003507395.1",
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            },
            {
                "accession": "GCA_017469445.1",
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            {
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.16,
        "cell_length": 0.434,
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        "growth_tmp": 33.457,
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        "genome_size": 4165901.003,
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        "coding_genes": 3796.985,
        "rRNA16S_genes": 9.374,
        "tRNA_genes": 78.312,
        "gram_stain": 0.945,
        "sporulation": 0.967,
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        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
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        "mesophilic_range_tmp": 0.944,
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        "bacillus_cell_shape": 1.0,
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        "coccobacillus_cell_shape": 0.0,
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        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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    ],
    "_genome_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
        "o__TANB77",
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        "Bacillota",
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        "Clostridia",
        "TANB77",
        "CAG-508",
        "CAG-273",
        "CAG-273",
        "sp000435755"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}