{
    "type": "genome",
    "identifier": "GCA_938082525.1",
    "organism": "Prescottella equi",
    "title": "Prescottella equi",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "marine college, shandong university",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938082525.1",
        "bioproject": "PRJEB50838",
        "biosample": "SAMEA14074540",
        "wgs_master": "CALLLC000000000.1",
        "refseq_category": "na",
        "taxid": "43767",
        "species_taxid": "43767",
        "organism_name": "Prescottella equi",
        "infraspecific_name": "",
        "isolate": "S4_Bin_METABAT__356_1",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/30",
        "asm_name": "S4_Bin_METABAT__356_1",
        "submitter": "marine college, shandong university",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/082/525/GCA_938082525.1_S4_Bin_METABAT_356_1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-30",
    "dateModified": "2023-01-30",
    "datePublished": "2023-01-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Prescottella equi"
        ],
        "sample_taxid": [
            "43767"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "1.326 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4865496",
        "Number of Sequences": "82",
        "Longest Sequences (bp)": "281039",
        "N50 (bp)": "94300",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.9",
        "Number of CDSs": "4579",
        "Average Protein Length": "320.5",
        "Coding Ratio (%)": "90.5",
        "Number of rRNAs": "2",
        "Number of tRNAs": "56",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Prescottella equi",
                "strain": "strain=DSM 20307",
                "accession": "GCA_002094305.1",
                "taxid": 43767,
                "species_taxid": 43767,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.9188,
                "matched_fragments": 1509,
                "total_fragments": 1580,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Prescottella equi",
                "strain": "strain=NCTC1621",
                "accession": "GCA_900455845.1",
                "taxid": 43767,
                "species_taxid": 43767,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.9174,
                "matched_fragments": 1524,
                "total_fragments": 1580,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Prescottella equi",
                "strain": "strain=C 7",
                "accession": "GCA_000473915.1",
                "taxid": 43767,
                "species_taxid": 43767,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.9035,
                "matched_fragments": 1506,
                "total_fragments": 1580,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Prescottella equi",
                "strain": "strain=NBRC 101255",
                "accession": "GCA_001552575.1",
                "taxid": 43767,
                "species_taxid": 43767,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.893,
                "matched_fragments": 1497,
                "total_fragments": 1580,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Prescottella agglutinans",
                "strain": "strain=CCTCC AB2014297",
                "accession": "GCA_004011865.1",
                "taxid": 1644129,
                "species_taxid": 1644129,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.9394,
                "matched_fragments": 1247,
                "total_fragments": 1580,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodococcus xishaensis",
                "strain": "strain=LHW51113",
                "accession": "GCA_004011825.1",
                "taxid": 2487364,
                "species_taxid": 2487364,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.056,
                "matched_fragments": 822,
                "total_fragments": 1580,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001646645.1",
                "gtdb_species": "s__Rhodococcus hoagii",
                "ani": 99.1381,
                "matched_fragments": 1381,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.01",
                "min_intra_species_ani": "98.63",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 61,
                "status": "conclusive"
            },
            {
                "accession": "GCF_003051005.1",
                "gtdb_species": "s__Rhodococcus sp003051005",
                "ani": 86.6947,
                "matched_fragments": 1351,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004011865.1",
                "gtdb_species": "s__Rhodococcus agglutinans",
                "ani": 85.9361,
                "matched_fragments": 1247,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000738775.1",
                "gtdb_species": "s__Rhodococcus defluvii",
                "ani": 85.1913,
                "matched_fragments": 1177,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_013348805.1",
                "gtdb_species": "s__Rhodococcus sp003350365",
                "ani": 85.0108,
                "matched_fragments": 1188,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.85",
                "min_intra_species_ani": "98.85",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_005484805.1",
                "gtdb_species": "s__Rhodococcus sp005484805",
                "ani": 84.9292,
                "matched_fragments": 1208,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_005434945.1",
                "gtdb_species": "s__Rhodococcus subtropicus",
                "ani": 83.4567,
                "matched_fragments": 963,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004011835.1",
                "gtdb_species": "s__Rhodococcus sp004011835",
                "ani": 82.1245,
                "matched_fragments": 828,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004011825.1",
                "gtdb_species": "s__Rhodococcus sp004011825",
                "ani": 82.0404,
                "matched_fragments": 824,
                "total_fragments": 1580,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Mycobacteriales",
        "f__Mycobacteriaceae",
        "g__Rhodococcus",
        "s__Rhodococcus equi"
    ],
    "_genome_taxon": [
        "Prescottella",
        "equi",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Mycobacteriales",
        "f__Mycobacteriaceae",
        "g__Rhodococcus",
        "s__Rhodococcus equi",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Mycobacteriales",
        "Mycobacteriaceae",
        "Rhodococcus",
        "Rhodococcus",
        "equi"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}