{ "type": "genome", "identifier": "GCA_938083445.1", "organism": "uncultured Ulvibacter sp.", "title": "uncultured Ulvibacter sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "marine college, shandong university", "publication": [ {} ], "properties": { "assembly_accession": "GCA_938083445.1", "bioproject": "PRJEB50838", "biosample": "SAMEA14074432", "wgs_master": "CALKCP000000000.1", "refseq_category": "na", "taxid": "431312", "species_taxid": "431312", "organism_name": "uncultured Ulvibacter sp.", "infraspecific_name": "", "isolate": "S3_Bin_METABAT__77_1", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/25", "asm_name": "S3_Bin_METABAT__77_1", "submitter": "marine college, shandong university", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/083/445/GCA_938083445.1_S3_Bin_METABAT_77_1", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-25", "dateModified": "2023-01-25", "datePublished": "2023-01-25", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Ulvibacter sp." ], "sample_taxid": [ "431312" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "0.659 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2306112", "Number of Sequences": "38", "Longest Sequences (bp)": "280978", "N50 (bp)": "99832", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "37.6", "Number of CDSs": "1955", "Average Protein Length": "345.3", "Coding Ratio (%)": "87.8", "Number of rRNAs": "0", "Number of tRNAs": "31", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Ulvibacter litoralis", "strain": "strain=DSM 16195", "accession": "GCA_900102055.1", "taxid": 227084, "species_taxid": 227084, "relation_to_type": "type", "validated": true, "ani": 77.7411, "matched_fragments": 193, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ulvibacter litoralis", "strain": "strain=KCTC 12104", "accession": "GCA_014651275.1", "taxid": 227084, "species_taxid": 227084, "relation_to_type": "type", "validated": true, "ani": 77.7011, "matched_fragments": 191, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ulvibacter antarcticus", "strain": "strain=DSM 23424", "accession": "GCA_003688405.1", "taxid": 442714, "species_taxid": 442714, "relation_to_type": "type", "validated": true, "ani": 77.5254, "matched_fragments": 158, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cochleicola gelatinilyticus", "strain": "strain=LPB0005", "accession": "GCA_001637325.1", "taxid": 1763537, "species_taxid": 1763537, "relation_to_type": "type", "validated": true, "ani": 77.0998, "matched_fragments": 111, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aequorivita vladivostokensis", "strain": "strain=KMM 3516", "accession": "GCA_000952855.1", "taxid": 171194, "species_taxid": 171194, "relation_to_type": "type", "validated": true, "ani": 77.0054, "matched_fragments": 66, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Patiriisocius marinus", "strain": "strain=NBRC 109484", "accession": "GCA_008974325.1", "taxid": 1397112, "species_taxid": 1397112, "relation_to_type": "type", "validated": true, "ani": 76.8367, "matched_fragments": 105, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Patiriisocius marinistellae", "strain": "strain=KK4", "accession": "GCA_009014635.1", "taxid": 2494560, "species_taxid": 2494560, "relation_to_type": "type", "validated": true, "ani": 76.8227, "matched_fragments": 96, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aequorivita aquimaris", "strain": "strain=D-24", "accession": "GCA_001573155.1", "taxid": 1548749, "species_taxid": 1548749, "relation_to_type": "type", "validated": true, "ani": 76.7889, "matched_fragments": 75, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella epiphytica", "strain": "strain=KCTC 12220", "accession": "GCA_014651315.1", "taxid": 262005, "species_taxid": 262005, "relation_to_type": "type", "validated": true, "ani": 76.607, "matched_fragments": 53, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aequorivita sublithincola", "strain": "strain=DSM 14238", "accession": "GCA_000265385.1", "taxid": 101385, "species_taxid": 101385, "relation_to_type": "type", "validated": true, "ani": 76.5147, "matched_fragments": 94, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter amylolyticus", "strain": "strain=RU-4-M-4", "accession": "GCA_007559325.1", "taxid": 1608400, "species_taxid": 1608400, "relation_to_type": "type", "validated": true, "ani": 76.5003, "matched_fragments": 56, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter amylolyticus", "strain": "strain=DSM 29199", "accession": "GCA_014202225.1", "taxid": 1608400, "species_taxid": 1608400, "relation_to_type": "type", "validated": true, "ani": 76.5003, "matched_fragments": 56, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter amylolyticus", "strain": "strain=RU-4-M-4", "accession": "GCA_008630605.1", "taxid": 1608400, "species_taxid": 1608400, "relation_to_type": "type", "validated": true, "ani": 76.4844, "matched_fragments": 55, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter vaceletii", "strain": "strain=DSM 25230", "accession": "GCA_003634105.1", "taxid": 1206816, "species_taxid": 1206816, "relation_to_type": "type", "validated": true, "ani": 76.3647, "matched_fragments": 53, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aequorivita capsosiphonis", "strain": "strain=DSM 23843", "accession": "GCA_000429125.1", "taxid": 487317, "species_taxid": 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"validated": true, "ani": 76.0819, "matched_fragments": 53, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina pacifica", "strain": "strain=SW150", "accession": "GCA_000520955.1", "taxid": 1296415, "species_taxid": 1296415, "relation_to_type": "type", "validated": true, "ani": 76.0595, "matched_fragments": 56, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pontimicrobium aquaticum", "strain": "strain=CAU 1491", "accession": "GCA_005047595.1", "taxid": 2565367, "species_taxid": 2565367, "relation_to_type": "type", "validated": true, "ani": 75.9535, "matched_fragments": 59, "total_fragments": 750, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900102055.1", "gtdb_species": "s__Ulvibacter litoralis", "ani": 77.7411, "matched_fragments": 193, 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