{
    "type": "genome",
    "identifier": "GCA_938085475.1",
    "organism": "uncultured Flavobacteriaceae bacterium",
    "title": "uncultured Flavobacteriaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "marine college, shandong university",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938085475.1",
        "bioproject": "PRJEB50838",
        "biosample": "SAMEA14074538",
        "wgs_master": "CALKGS000000000.1",
        "refseq_category": "na",
        "taxid": "165436",
        "species_taxid": "165436",
        "organism_name": "uncultured Flavobacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "S4_Bin_METABAT__334_1",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/25",
        "asm_name": "S4_Bin_METABAT__334_1",
        "submitter": "marine college, shandong university",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/085/475/GCA_938085475.1_S4_Bin_METABAT_334_1",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-25",
    "dateModified": "2023-01-25",
    "datePublished": "2023-01-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Flavobacteriaceae bacterium"
        ],
        "sample_taxid": [
            "165436"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.538 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1872614",
        "Number of Sequences": "33",
        "Longest Sequences (bp)": "152363",
        "N50 (bp)": "70967",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "40.3",
        "Number of CDSs": "1712",
        "Average Protein Length": "332.6",
        "Coding Ratio (%)": "91.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "29",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002292265.1",
                "gtdb_species": "s__MS024-2A sp002292265",
                "ani": 97.2529,
                "matched_fragments": 538,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.71",
                "min_intra_species_ani": "99.21",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 6,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017852075.1",
                "gtdb_species": "s__MS024-2A sp017852075",
                "ani": 80.663,
                "matched_fragments": 422,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.70",
                "min_intra_species_ani": "99.69",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_000173095.1",
                "gtdb_species": "s__MS024-2A sp000173095",
                "ani": 77.5892,
                "matched_fragments": 112,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.61",
                "min_intra_species_ani": "99.48",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 16,
                "status": "-"
            },
            {
                "accession": "GCA_002167945.1",
                "gtdb_species": "s__MS024-2A sp002167945",
                "ani": 77.4744,
                "matched_fragments": 107,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_008081175.1",
                "gtdb_species": "s__MS024-2A sp008081175",
                "ani": 77.095,
                "matched_fragments": 139,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.02",
                "min_intra_species_ani": "98.61",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_002705385.1",
                "gtdb_species": "s__MS024-2A sp002705385",
                "ani": 77.049,
                "matched_fragments": 67,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002714815.1",
                "gtdb_species": "s__MS024-2A sp002714815",
                "ani": 76.9768,
                "matched_fragments": 133,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905182305.1",
                "gtdb_species": "s__MS024-2A sp905182305",
                "ani": 76.9633,
                "matched_fragments": 84,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011525195.1",
                "gtdb_species": "s__MS024-2A sp011525195",
                "ani": 76.7705,
                "matched_fragments": 90,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905181895.1",
                "gtdb_species": "s__MS024-2A sp905181895",
                "ani": 76.7166,
                "matched_fragments": 66,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902606525.1",
                "gtdb_species": "s__MS024-2A sp902606525",
                "ani": 76.4595,
                "matched_fragments": 68,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902512755.1",
                "gtdb_species": "s__MS024-2A sp902512755",
                "ani": 76.4562,
                "matched_fragments": 69,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902618245.1",
                "gtdb_species": "s__MS024-2A sp902618245",
                "ani": 76.4376,
                "matched_fragments": 51,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.05",
                "min_intra_species_ani": "96.19",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902613595.1",
                "gtdb_species": "s__MS024-2A sp902613595",
                "ani": 76.3221,
                "matched_fragments": 65,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MS024-2A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002364535.1",
                "gtdb_species": "s__UBA8316 sp002364535",
                "ani": 76.2774,
                "matched_fragments": 54,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__UBA8316",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.85",
                "min_intra_species_ani": "99.85",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003023645.1",
                "gtdb_species": "s__UBA7428 sp003023645",
                "ani": 75.9302,
                "matched_fragments": 51,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__UBA7428",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.50",
                "min_intra_species_ani": "99.50",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.335,
        "cell_length": 0.307,
        "doubling_h": 1.285,
        "growth_tmp": 26.48,
        "optimum_tmp": 26.613,
        "optimum_ph": 7.273,
        "genome_size": 3914984.758,
        "gc_content": 35.899,
        "coding_genes": 3178.027,
        "rRNA16S_genes": 3.891,
        "tRNA_genes": 50.834,
        "gram_stain": 0.0,
        "sporulation": 0.007,
        "motility": 0.361,
        "range_salinity": 0.615,
        "facultative_respiration": 0.043,
        "anaerobic_respiration": 0.012,
        "aerobic_respiration": 0.944,
        "mesophilic_range_tmp": 0.895,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.104,
        "bacillus_cell_shape": 0.984,
        "coccus_cell_shape": 0.005,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.01,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__MS024-2A",
        "s__MS024-2A sp002292265"
    ],
    "_genome_taxon": [
        "uncultured",
        "Flavobacteriaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__MS024-2A",
        "s__MS024-2A sp002292265",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Flavobacteriaceae",
        "MS024-2A",
        "MS024-2A",
        "sp002292265"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}