{
    "type": "genome",
    "identifier": "GCA_938086685.1",
    "organism": "uncultured Acidimicrobiales bacterium",
    "title": "uncultured Acidimicrobiales bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "marine college, shandong university",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938086685.1",
        "bioproject": "PRJEB50838",
        "biosample": "SAMEA14074544",
        "wgs_master": "CALLLM000000000.1",
        "refseq_category": "na",
        "taxid": "310071",
        "species_taxid": "310071",
        "organism_name": "uncultured Acidimicrobiales bacterium",
        "infraspecific_name": "",
        "isolate": "S4_Bin_METABAT__39_1",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/28",
        "asm_name": "S4_Bin_METABAT__39_1",
        "submitter": "marine college, shandong university",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/086/685/GCA_938086685.1_S4_Bin_METABAT_39_1",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-28",
    "dateModified": "2023-01-28",
    "datePublished": "2023-01-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Acidimicrobiales bacterium"
        ],
        "sample_taxid": [
            "310071"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "1.070 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 83.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3768785",
        "Number of Sequences": "329",
        "Longest Sequences (bp)": "74914",
        "N50 (bp)": "16359",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.2",
        "Number of CDSs": "3356",
        "Average Protein Length": "303.4",
        "Coding Ratio (%)": "81.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Ilumatobacter fluminis",
                "strain": "strain=DSM 18936",
                "accession": "GCA_004364865.1",
                "taxid": 467091,
                "species_taxid": 467091,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5263,
                "matched_fragments": 61,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ilumatobacter coccineus",
                "strain": "strain=YM16-304",
                "accession": "GCA_000348785.1",
                "taxid": 467094,
                "species_taxid": 467094,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3626,
                "matched_fragments": 67,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 83.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_003485885.1",
                "gtdb_species": "s__UBA10347 sp003485885",
                "ani": 95.9835,
                "matched_fragments": 673,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA10347;g__UBA10347",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.91",
                "min_intra_species_ani": "98.91",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_905182135.1",
                "gtdb_species": "s__UBA10347 sp905182135",
                "ani": 78.4311,
                "matched_fragments": 269,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA10347;g__UBA10347",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.35,
        "cell_length": 0.194,
        "doubling_h": null,
        "growth_tmp": 34.166,
        "optimum_tmp": 34.25,
        "optimum_ph": 4.45,
        "genome_size": 2693748.75,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.2,
        "sporulation": 0.0,
        "motility": 0.25,
        "range_salinity": null,
        "facultative_respiration": 0.25,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.75,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__UBA10347",
        "g__UBA10347",
        "s__UBA10347 sp003485885"
    ],
    "_genome_taxon": [
        "uncultured",
        "Acidimicrobiales",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__UBA10347",
        "g__UBA10347",
        "s__UBA10347 sp003485885",
        "Bacteria",
        "Actinomycetota",
        "Acidimicrobiia",
        "Acidimicrobiales",
        "UBA10347",
        "UBA10347",
        "UBA10347",
        "sp003485885"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}