{
    "type": "genome",
    "identifier": "GCA_939799165.1",
    "organism": "uncultured Lentisphaeraceae bacterium",
    "title": "uncultured Lentisphaeraceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_939799165.1",
        "bioproject": "PRJEB41442",
        "biosample": "SAMEA14251132",
        "wgs_master": "CALNFU000000000.1",
        "refseq_category": "na",
        "taxid": "1798912",
        "species_taxid": "1798912",
        "organism_name": "uncultured Lentisphaeraceae bacterium",
        "infraspecific_name": "",
        "isolate": "SRR2134645_bin.57_metaWRAP_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/03",
        "asm_name": "SRR2134645_bin.57_metaWRAP_v1.1_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/939/799/165/GCA_939799165.1_SRR2134645_bin.57_metaWRAP_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-03",
    "dateModified": "2022-05-03",
    "datePublished": "2022-05-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Lentisphaeraceae bacterium"
        ],
        "sample_taxid": [
            "1798912"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Malaysia"
        ],
        "sample_host_location_id": [],
        "data_size": "0.472 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1718051",
        "Number of Sequences": "246",
        "Longest Sequences (bp)": "26982",
        "N50 (bp)": "8388",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "69.0",
        "Number of CDSs": "1294",
        "Average Protein Length": "353.0",
        "Coding Ratio (%)": "79.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "29",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Thermophilibacter mediterraneus",
                "strain": "strain=Marseille-P3256",
                "accession": "GCA_900119385.1",
                "taxid": 1871031,
                "species_taxid": 1871031,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.311,
                "matched_fragments": 51,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Salinarimonas rosea",
                "strain": "strain=DSM 21201",
                "accession": "GCA_000429045.1",
                "taxid": 552063,
                "species_taxid": 552063,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1816,
                "matched_fragments": 72,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vineibacter terrae",
                "strain": "strain=CC-CFT640",
                "accession": "GCA_008039615.1",
                "taxid": 2586908,
                "species_taxid": 2586908,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.009,
                "matched_fragments": 59,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardioides halotolerans",
                "strain": "strain=DSM 19273",
                "accession": "GCA_000422805.1",
                "taxid": 433660,
                "species_taxid": 433660,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9403,
                "matched_fragments": 55,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardioides albidus",
                "strain": "strain=CCTCC AB 2015297",
                "accession": "GCA_006335005.1",
                "taxid": 1517589,
                "species_taxid": 1517589,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9085,
                "matched_fragments": 51,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nannocystis exedens",
                "strain": "strain=ATCC 25963",
                "accession": "GCA_900112715.1",
                "taxid": 54,
                "species_taxid": 54,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.713,
                "matched_fragments": 113,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nannocystis exedens",
                "strain": "strain=DSM 71",
                "accession": "GCA_002343915.1",
                "taxid": 54,
                "species_taxid": 54,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7094,
                "matched_fragments": 114,
                "total_fragments": 453,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018713405.1",
                "gtdb_species": "s__Spyradenecus faecavium",
                "ani": 99.1928,
                "matched_fragments": 368,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__Spyradenecus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900771325.1",
                "gtdb_species": "s__Spyradenecus sp900771325",
                "ani": 80.8259,
                "matched_fragments": 246,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__Spyradenecus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004555175.1",
                "gtdb_species": "s__Spyradenecus sp004555175",
                "ani": 80.0948,
                "matched_fragments": 223,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__Spyradenecus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017558005.1",
                "gtdb_species": "s__Spyradenecus sp017558005",
                "ani": 77.4151,
                "matched_fragments": 58,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__Spyradenecus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.80",
                "min_intra_species_ani": "95.80",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902770045.1",
                "gtdb_species": "s__UBA1067 sp902770045",
                "ani": 77.2261,
                "matched_fragments": 86,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__UBA1067",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.51",
                "min_intra_species_ani": "95.51",
                "mean_intra_species_af": "0.70",
                "min_intra_species_af": "0.70",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902764415.1",
                "gtdb_species": "s__UBA1067 sp002351765",
                "ani": 77.187,
                "matched_fragments": 87,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__UBA1067",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.23",
                "min_intra_species_ani": "96.23",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_017962605.1",
                "gtdb_species": "s__RGIG5952 sp017962605",
                "ani": 76.9355,
                "matched_fragments": 75,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__JAAYLN01;g__RGIG5952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.07",
                "min_intra_species_ani": "95.07",
                "mean_intra_species_af": "0.68",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900547945.1",
                "gtdb_species": "s__RUG572 sp900547945",
                "ani": 76.7183,
                "matched_fragments": 96,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.14",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002449695.1",
                "gtdb_species": "s__UBA1067 sp002449695",
                "ani": 76.5301,
                "matched_fragments": 69,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__UBA1067",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012521875.1",
                "gtdb_species": "s__JAAYLN01 sp012521875",
                "ani": 76.4969,
                "matched_fragments": 72,
                "total_fragments": 453,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__JAAYLN01;g__JAAYLN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.097,
        "cell_length": -0.097,
        "doubling_h": null,
        "growth_tmp": 23.0,
        "optimum_tmp": 20.0,
        "optimum_ph": 8.0,
        "genome_size": 6023180.0,
        "gc_content": 41.0,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Kiritimatiellia",
        "o__RFP12",
        "f__UBA1067",
        "g__Spyradenecus",
        "s__Spyradenecus faecavium"
    ],
    "_genome_taxon": [
        "uncultured",
        "Lentisphaeraceae",
        "bacterium",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Kiritimatiellia",
        "o__RFP12",
        "f__UBA1067",
        "g__Spyradenecus",
        "s__Spyradenecus faecavium",
        "Bacteria",
        "Verrucomicrobiota",
        "Kiritimatiellia",
        "RFP12",
        "UBA1067",
        "Spyradenecus",
        "Spyradenecus",
        "faecavium"
    ],
    "_meo": [
        {
            "id": "MEO_0000460",
            "label": "cecum"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}