{
    "type": "genome",
    "identifier": "GCA_943844085.1",
    "organism": "uncultured Flavobacteriaceae bacterium",
    "title": "uncultured Flavobacteriaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Max Planck Institute for Marine Microbiology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_943844085.1",
        "bioproject": "PRJEB52999",
        "biosample": "SAMEA110069361",
        "wgs_master": "CALTHQ000000000.1",
        "refseq_category": "na",
        "taxid": "165436",
        "species_taxid": "165436",
        "organism_name": "uncultured Flavobacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "ILMN-20200506-m27",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "20200506_Bin_MAXBIN__008_sub_1-contigs.fa",
        "submitter": "Max Planck Institute for Marine Microbiology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/844/085/GCA_943844085.1_20200506_Bin_MAXBIN_008_sub_1-contigs.fa",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Flavobacteriaceae bacterium"
        ],
        "sample_taxid": [
            "165436"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "North Sea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.331 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 79.17,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1185133",
        "Number of Sequences": "69",
        "Longest Sequences (bp)": "141154",
        "N50 (bp)": "27625",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "29.2",
        "Number of CDSs": "1000",
        "Average Protein Length": "341.3",
        "Coding Ratio (%)": "86.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "18",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Seonamhaeicola maritimus",
                "strain": "strain=1505",
                "accession": "GCA_008056315.1",
                "taxid": 2591822,
                "species_taxid": 2591822,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1406,
                "matched_fragments": 54,
                "total_fragments": 360,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 79.17,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_004213995.1",
                "gtdb_species": "s__SGZJ01 sp004213995",
                "ani": 95.9607,
                "matched_fragments": 280,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__SGZJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.83",
                "min_intra_species_ani": "95.53",
                "mean_intra_species_af": "0.71",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018674025.1",
                "gtdb_species": "s__SGZJ01 sp018674025",
                "ani": 90.2247,
                "matched_fragments": 243,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__SGZJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902515565.1",
                "gtdb_species": "s__SGZJ01 sp902515565",
                "ani": 90.1102,
                "matched_fragments": 231,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__SGZJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905182835.1",
                "gtdb_species": "s__SGZJ01 sp905182835",
                "ani": 79.918,
                "matched_fragments": 233,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__SGZJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_011777505.1",
                "gtdb_species": "s__CAU-1491 sp011777505",
                "ani": 76.8139,
                "matched_fragments": 50,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__CAU-1491",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003443635.1",
                "gtdb_species": "s__AU392 sp003443635",
                "ani": 76.5832,
                "matched_fragments": 63,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__AU392",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_018860825.1",
                "gtdb_species": "s__Oceanihabitans sp018860825",
                "ani": 76.2533,
                "matched_fragments": 58,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Oceanihabitans",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001747085.1",
                "gtdb_species": "s__Algibacter_C aquaticus",
                "ani": 76.1814,
                "matched_fragments": 59,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter_C",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902510415.1",
                "gtdb_species": "s__MED-G13 sp902510415",
                "ani": 76.0762,
                "matched_fragments": 57,
                "total_fragments": 360,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G13",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.10",
                "min_intra_species_ani": "98.10",
                "mean_intra_species_af": "0.69",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.335,
        "cell_length": 0.307,
        "doubling_h": 1.285,
        "growth_tmp": 26.48,
        "optimum_tmp": 26.613,
        "optimum_ph": 7.273,
        "genome_size": 3914984.758,
        "gc_content": 35.899,
        "coding_genes": 3178.027,
        "rRNA16S_genes": 3.891,
        "tRNA_genes": 50.834,
        "gram_stain": 0.0,
        "sporulation": 0.007,
        "motility": 0.361,
        "range_salinity": 0.615,
        "facultative_respiration": 0.043,
        "anaerobic_respiration": 0.012,
        "aerobic_respiration": 0.944,
        "mesophilic_range_tmp": 0.895,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.104,
        "bacillus_cell_shape": 0.984,
        "coccus_cell_shape": 0.005,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.01,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__SGZJ01",
        "s__SGZJ01 sp016777305"
    ],
    "_genome_taxon": [
        "uncultured",
        "Flavobacteriaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__SGZJ01",
        "s__SGZJ01 sp016777305",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Flavobacteriaceae",
        "SGZJ01",
        "SGZJ01",
        "sp016777305"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}