{
    "type": "genome",
    "identifier": "GCA_943844105.1",
    "organism": "uncultured Pseudomonadales bacterium",
    "title": "uncultured Pseudomonadales bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Max Planck Institute for Marine Microbiology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_943844105.1",
        "bioproject": "PRJEB52999",
        "biosample": "SAMEA110069190",
        "wgs_master": "CALTIK000000000.1",
        "refseq_category": "na",
        "taxid": "332614",
        "species_taxid": "332614",
        "organism_name": "uncultured Pseudomonadales bacterium",
        "infraspecific_name": "",
        "isolate": "ILMN-20200430-m82",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "20200430_Bin_Bin_220_sub_1-contigs.fa",
        "submitter": "Max Planck Institute for Marine Microbiology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/844/105/GCA_943844105.1_20200430_Bin_Bin_220_sub_1-contigs.fa",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Pseudomonadales bacterium"
        ],
        "sample_taxid": [
            "332614"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "North Sea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.537 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 2.08,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1853179",
        "Number of Sequences": "129",
        "Longest Sequences (bp)": "78948",
        "N50 (bp)": "24283",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.9",
        "Number of CDSs": "1617",
        "Average Protein Length": "321.9",
        "Coding Ratio (%)": "84.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "28",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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        "cc_result": {
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            "contamination": 2.08,
            "strain_heterogeneity": 100.0
        },
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905478975.1",
                "gtdb_species": "s__HTCC2207 sp905478975",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017858135.1",
                "gtdb_species": "s__HTCC2207 sp017858135",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_000511875.1",
                "gtdb_species": "s__HTCC2207 sp000511875",
                "ani": 78.4375,
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                "total_fragments": 555,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000153445.1",
                "gtdb_species": "s__HTCC2207 sp000153445",
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                "matched_fragments": 239,
                "total_fragments": 555,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.85",
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                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_905478725.1",
                "gtdb_species": "s__HTCC2207 sp905478725",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905182245.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002335945.1",
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                "mean_intra_species_ani": "99.61",
                "min_intra_species_ani": "99.20",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_905182265.1",
                "gtdb_species": "s__HTCC2207 sp905182265",
                "ani": 78.0024,
                "matched_fragments": 118,
                "total_fragments": 555,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_017858295.1",
                "gtdb_species": "s__HTCC2207 sp017858295",
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                "mean_intra_species_ani": "97.83",
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                "mean_intra_species_af": "0.77",
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            },
            {
                "accession": "GCA_018664075.1",
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                "mean_intra_species_ani": "99.59",
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            },
            {
                "accession": "GCA_002378645.1",
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                "ani": 77.1611,
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                "mean_intra_species_ani": "99.56",
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            },
            {
                "accession": "GCA_002334915.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207",
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                "mean_intra_species_ani": "99.52",
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                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.159,
        "cell_length": 0.181,
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        "growth_tmp": 28.99,
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        "genome_size": 4973266.217,
        "gc_content": 54.575,
        "coding_genes": 4450.277,
        "rRNA16S_genes": 5.452,
        "tRNA_genes": 67.069,
        "gram_stain": 0.0,
        "sporulation": 0.007,
        "motility": 0.593,
        "range_salinity": 0.666,
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        "mesophilic_range_tmp": 0.92,
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        "bacillus_cell_shape": 0.791,
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        "filament_cell_shape": 0.0,
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        "vibrio_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Porticoccaceae",
        "g__HTCC2207",
        "s__HTCC2207 sp943846685"
    ],
    "_genome_taxon": [
        "uncultured",
        "Pseudomonadales",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
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        "s__HTCC2207 sp943846685",
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        "Pseudomonadota",
        "Gammaproteobacteria",
        "Pseudomonadales",
        "Porticoccaceae",
        "HTCC2207",
        "HTCC2207",
        "sp943846685"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}