{
    "type": "genome",
    "identifier": "GCA_943844355.1",
    "organism": "uncultured Ulvibacter sp.",
    "title": "uncultured Ulvibacter sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Max Planck Institute for Marine Microbiology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_943844355.1",
        "bioproject": "PRJEB52999",
        "biosample": "SAMEA110069304",
        "wgs_master": "CALTIS000000000.1",
        "refseq_category": "na",
        "taxid": "431312",
        "species_taxid": "431312",
        "organism_name": "uncultured Ulvibacter sp.",
        "infraspecific_name": "",
        "isolate": "PACB-20200430-m24",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "20200430_METABAT__76_1-contigs.fa",
        "submitter": "Max Planck Institute for Marine Microbiology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/844/355/GCA_943844355.1_20200430_METABAT_76_1-contigs.fa",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Ulvibacter sp."
        ],
        "sample_taxid": [
            "431312"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "North Sea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.337 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 62.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1198118",
        "Number of Sequences": "7",
        "Longest Sequences (bp)": "564619",
        "N50 (bp)": "370638",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.0",
        "Number of CDSs": "1140",
        "Average Protein Length": "315.7",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "20",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Patiriisocius marinistellae",
                "strain": "strain=KK4",
                "accession": "GCA_009014635.1",
                "taxid": 2494560,
                "species_taxid": 2494560,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1559,
                "matched_fragments": 104,
                "total_fragments": 395,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Patiriisocius marinus",
                "strain": "strain=NBRC 109484",
                "accession": "GCA_008974325.1",
                "taxid": 1397112,
                "species_taxid": 1397112,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8534,
                "matched_fragments": 101,
                "total_fragments": 395,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ulvibacter litoralis",
                "strain": "strain=KCTC 12104",
                "accession": "GCA_014651275.1",
                "taxid": 227084,
                "species_taxid": 227084,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7846,
                "matched_fragments": 59,
                "total_fragments": 395,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ulvibacter litoralis",
                "strain": "strain=DSM 16195",
                "accession": "GCA_900102055.1",
                "taxid": 227084,
                "species_taxid": 227084,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7603,
                "matched_fragments": 63,
                "total_fragments": 395,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulophaga algicola",
                "strain": "strain=DSM 14237",
                "accession": "GCA_000186265.1",
                "taxid": 59600,
                "species_taxid": 59600,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6464,
                "matched_fragments": 51,
                "total_fragments": 395,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 62.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_905182755.1",
                "gtdb_species": "s__Patiriisocius sp905182755",
                "ani": 92.4084,
                "matched_fragments": 289,
                "total_fragments": 395,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Patiriisocius",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.66",
                "min_intra_species_ani": "96.28",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_018656255.1",
                "gtdb_species": "s__Patiriisocius sp018656255",
                "ani": 91.0351,
                "matched_fragments": 215,
                "total_fragments": 395,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Patiriisocius",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.76",
                "min_intra_species_ani": "97.76",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003450155.1",
                "gtdb_species": "s__Patiriisocius sp003450155",
                "ani": 88.0639,
                "matched_fragments": 282,
                "total_fragments": 395,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Patiriisocius",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009014635.1",
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                "matched_fragments": 104,
                "total_fragments": 395,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Patiriisocius",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_008974325.1",
                "gtdb_species": "s__Patiriisocius marinus",
                "ani": 77.8534,
                "matched_fragments": 101,
                "total_fragments": 395,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Patiriisocius",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900102055.1",
                "gtdb_species": "s__Ulvibacter litoralis",
                "ani": 77.7603,
                "matched_fragments": 63,
                "total_fragments": 395,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Ulvibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_018860825.1",
                "gtdb_species": "s__Oceanihabitans sp018860825",
                "ani": 76.643,
                "matched_fragments": 52,
                "total_fragments": 395,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Oceanihabitans",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.304,
        "cell_length": 0.418,
        "doubling_h": null,
        "growth_tmp": 26.0,
        "optimum_tmp": 24.25,
        "optimum_ph": 7.35,
        "genome_size": 3833900.5,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.5,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__Patiriisocius",
        "s__Patiriisocius sp943789105"
    ],
    "_genome_taxon": [
        "uncultured",
        "Ulvibacter",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__Patiriisocius",
        "s__Patiriisocius sp943789105",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Flavobacteriaceae",
        "Patiriisocius",
        "Patiriisocius",
        "sp943789105"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}