{
    "type": "genome",
    "identifier": "GCA_943845705.1",
    "organism": "uncultured Flavobacteriaceae bacterium",
    "title": "uncultured Flavobacteriaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Max Planck Institute for Marine Microbiology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_943845705.1",
        "bioproject": "PRJEB52999",
        "biosample": "SAMEA110069333",
        "wgs_master": "CALTOR000000000.1",
        "refseq_category": "na",
        "taxid": "165436",
        "species_taxid": "165436",
        "organism_name": "uncultured Flavobacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "ILMN-20200506-m17",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "20200506_Bin_contigs_Bin_147_1-contigs.fa",
        "submitter": "Max Planck Institute for Marine Microbiology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/845/705/GCA_943845705.1_20200506_Bin_contigs_Bin_147_1-contigs.fa",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Flavobacteriaceae bacterium"
        ],
        "sample_taxid": [
            "165436"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "North Sea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.276 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 62.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "988570",
        "Number of Sequences": "65",
        "Longest Sequences (bp)": "79001",
        "N50 (bp)": "21145",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "29.7",
        "Number of CDSs": "896",
        "Average Protein Length": "321.1",
        "Coding Ratio (%)": "87.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "25",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 62.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016777325.1",
                "gtdb_species": "s__MED-G11 sp016777325",
                "ani": 98.8212,
                "matched_fragments": 180,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_004214015.1",
                "gtdb_species": "s__MED-G11 sp004214015",
                "ani": 91.3649,
                "matched_fragments": 177,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.90",
                "min_intra_species_ani": "97.77",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_902509805.1",
                "gtdb_species": "s__MED-G11 sp902509805",
                "ani": 88.3099,
                "matched_fragments": 139,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.79",
                "min_intra_species_ani": "97.79",
                "mean_intra_species_af": "0.58",
                "min_intra_species_af": "0.58",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018646865.1",
                "gtdb_species": "s__MED-G11 sp014239615",
                "ani": 85.3298,
                "matched_fragments": 241,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.76",
                "min_intra_species_ani": "99.49",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 17,
                "status": "-"
            },
            {
                "accession": "GCA_902514615.1",
                "gtdb_species": "s__MED-G11 sp902514615",
                "ani": 83.8528,
                "matched_fragments": 189,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014239665.1",
                "gtdb_species": "s__MED-G11 sp014239665",
                "ani": 82.6649,
                "matched_fragments": 216,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.49",
                "min_intra_species_ani": "96.27",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCA_002457075.1",
                "gtdb_species": "s__MED-G11 sp002457075",
                "ani": 82.4367,
                "matched_fragments": 177,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.35",
                "min_intra_species_ani": "98.35",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_004213645.1",
                "gtdb_species": "s__MED-G11 sp004213645",
                "ani": 79.8237,
                "matched_fragments": 174,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.96",
                "min_intra_species_ani": "97.96",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902598525.1",
                "gtdb_species": "s__MED-G11 sp902598525",
                "ani": 77.9666,
                "matched_fragments": 143,
                "total_fragments": 300,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__MED-G11",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.61",
                "min_intra_species_ani": "96.61",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.335,
        "cell_length": 0.307,
        "doubling_h": 1.285,
        "growth_tmp": 26.48,
        "optimum_tmp": 26.613,
        "optimum_ph": 7.273,
        "genome_size": 3914984.758,
        "gc_content": 35.899,
        "coding_genes": 3178.027,
        "rRNA16S_genes": 3.891,
        "tRNA_genes": 50.834,
        "gram_stain": 0.0,
        "sporulation": 0.007,
        "motility": 0.361,
        "range_salinity": 0.615,
        "facultative_respiration": 0.043,
        "anaerobic_respiration": 0.012,
        "aerobic_respiration": 0.944,
        "mesophilic_range_tmp": 0.895,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.104,
        "bacillus_cell_shape": 0.984,
        "coccus_cell_shape": 0.005,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.01,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__Marisimplicoccus",
        "s__Marisimplicoccus sp016777325"
    ],
    "_genome_taxon": [
        "uncultured",
        "Flavobacteriaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__Marisimplicoccus",
        "s__Marisimplicoccus sp016777325",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Flavobacteriaceae",
        "Marisimplicoccus",
        "Marisimplicoccus",
        "sp016777325"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}