{
    "type": "genome",
    "identifier": "GCA_943913215.1",
    "organism": "Streptococcus mitis",
    "title": "Streptococcus mitis",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "NIH/NHGRI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_943913215.1",
        "bioproject": "PRJEB47281",
        "biosample": "SAMEA110089336",
        "wgs_master": "CALTWV000000000.1",
        "refseq_category": "na",
        "taxid": "28037",
        "species_taxid": "28037",
        "organism_name": "Streptococcus mitis",
        "infraspecific_name": "",
        "isolate": "Sl0ihReRBP_bin.9.MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/14",
        "asm_name": "Sl0ihReRBP_bin.9.MAG",
        "submitter": "NIH/NHGRI",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/913/215/GCA_943913215.1_Sl0ihReRBP_bin.9.MAG",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-14",
    "dateModified": "2022-06-14",
    "datePublished": "2022-06-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Streptococcus mitis"
        ],
        "sample_taxid": [
            "28037"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.501 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 72.6,
        "contamination": 2.08,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1729007",
        "Number of Sequences": "314",
        "Longest Sequences (bp)": "31428",
        "N50 (bp)": "7289",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.0",
        "Number of CDSs": "1471",
        "Average Protein Length": "292.1",
        "Coding Ratio (%)": "74.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "15",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Streptococcus mitis",
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                "accession": "GCA_002014755.1",
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                "species_taxid": 28037,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 94.9709,
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                "total_fragments": 415,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus mitis",
                "strain": "strain=NCTC12261",
                "accession": "GCA_900459425.1",
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                "relation_to_type": "suspected-type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus mitis",
                "strain": "strain=FDAARGOS 1456",
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                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus mitis",
                "strain": "strain=NCTC 12261",
                "accession": "GCA_000148585.3",
                "taxid": 28037,
                "species_taxid": 28037,
                "relation_to_type": "suspected-type",
                "validated": true,
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                "matched_fragments": 374,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus toyakuensis",
                "strain": "strain=TP1632",
                "accession": "GCA_024346585.1",
                "taxid": 2819619,
                "species_taxid": 2819619,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 368,
                "total_fragments": 415,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus vulneris",
                "strain": "strain=DM3B3",
                "accession": "GCA_019218685.1",
                "taxid": 2853160,
                "species_taxid": 2853160,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.4106,
                "matched_fragments": 363,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus symci",
                "strain": "strain=C17",
                "accession": "GCA_006385165.1",
                "taxid": 2588991,
                "species_taxid": 2588991,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.0562,
                "matched_fragments": 355,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus gwangjuense",
                "strain": "strain=ChDC B345",
                "accession": "GCA_003627155.1",
                "taxid": 1433513,
                "species_taxid": 1433513,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.0121,
                "matched_fragments": 361,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus chosunense",
                "strain": "strain=ChDC B353",
                "accession": "GCA_003626515.1",
                "taxid": 2707003,
                "species_taxid": 2707003,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.9743,
                "matched_fragments": 359,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus shenyangsis",
                "strain": "strain=D19",
                "accession": "GCA_006385785.1",
                "taxid": 2589786,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 92.5328,
                "matched_fragments": 359,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus pneumoniae",
                "strain": "strain=NCTC7465",
                "accession": "GCA_001457635.1",
                "taxid": 1313,
                "species_taxid": 1313,
                "relation_to_type": "type",
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                "ani": 91.4964,
                "matched_fragments": 358,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus pneumoniae",
                "strain": "strain=CCUG 28588",
                "accession": "GCA_001679535.1",
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                "relation_to_type": "type",
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                "ani": 91.475,
                "matched_fragments": 356,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus downii",
                "strain": "strain=CECT 9732",
                "accession": "GCA_004353325.1",
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                "species_taxid": 1968889,
                "relation_to_type": "type",
                "validated": true,
                "ani": 86.9229,
                "matched_fragments": 332,
                "total_fragments": 415,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus parasuis",
                "strain": "strain=SUT-286",
                "accession": "GCA_021654455.1",
                "taxid": 1501662,
                "species_taxid": 1501662,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.3146,
                "matched_fragments": 68,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptococcus oriscaviae",
                "strain": "strain=HKU75",
                "accession": "GCA_018137985.1",
                "taxid": 2781599,
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                "relation_to_type": "type",
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                "ani": 77.0884,
                "matched_fragments": 70,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 2.08,
            "strain_heterogeneity": 100.0
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        "gtdb_result": [
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                "accession": "GCF_002096855.1",
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                "matched_fragments": 387,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus",
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                "num_clustered_genomes": 2,
                "status": "conclusive"
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus",
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                "num_clustered_genomes": 25,
                "status": "-"
            },
            {
                "accession": "GCF_001810785.1",
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                "mean_intra_species_ani": "N/A",
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            },
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_002096895.1",
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                "mean_intra_species_ani": "N/A",
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            },
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                "accession": "GCF_001650315.1",
                "gtdb_species": "s__Streptococcus sp001650315",
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                "mean_intra_species_ani": "N/A",
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            {
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            },
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            },
            {
                "accession": "GCF_003626515.1",
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            },
            {
                "accession": "GCF_000148545.1",
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            },
            {
                "accession": "GCA_001914195.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus",
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                "mean_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_905221085.1",
                "gtdb_species": "s__Streptococcus sp905221085",
                "ani": 92.7525,
                "matched_fragments": 359,
                "total_fragments": 415,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_005144795.1",
                "gtdb_species": "s__Streptococcus mitis_BB",
                "ani": 92.5817,
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                "total_fragments": 415,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.49",
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                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_905221375.1",
                "gtdb_species": "s__Streptococcus sp905221375",
                "ani": 92.4646,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905221235.1",
                "gtdb_species": "s__Streptococcus sp905221235",
                "ani": 92.3868,
                "matched_fragments": 362,
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        "s__Streptococcus mitis_Y"
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    "_genome_taxon": [
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        "p__Bacillota",
        "c__Bacilli",
        "o__Lactobacillales",
        "f__Streptococcaceae",
        "g__Streptococcus",
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        "Bacillota",
        "Bacilli",
        "Lactobacillales",
        "Streptococcaceae",
        "Streptococcus",
        "Streptococcus",
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        "Y"
    ],
    "_meo": [
        {
            "id": "MEO_0000586",
            "label": "skin"
        }
    ],
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}