{
    "type": "genome",
    "identifier": "GCA_943913845.1",
    "organism": "uncultured Enterobacter sp.",
    "title": "uncultured Enterobacter sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "NIH/NHGRI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_943913845.1",
        "bioproject": "PRJEB47281",
        "biosample": "SAMEA110089033",
        "wgs_master": "CALTZS000000000.1",
        "refseq_category": "na",
        "taxid": "238202",
        "species_taxid": "238202",
        "organism_name": "uncultured Enterobacter sp.",
        "infraspecific_name": "",
        "isolate": "qV8uoywXEu_bin.10.MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/14",
        "asm_name": "qV8uoywXEu_bin.10.MAG",
        "submitter": "NIH/NHGRI",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/913/845/GCA_943913845.1_qV8uoywXEu_bin.10.MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-14",
    "dateModified": "2022-06-14",
    "datePublished": "2022-06-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Enterobacter sp."
        ],
        "sample_taxid": [
            "238202"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "1.326 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 98.96,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4624353",
        "Number of Sequences": "130",
        "Longest Sequences (bp)": "248091",
        "N50 (bp)": "54588",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.6",
        "Number of CDSs": "4325",
        "Average Protein Length": "314.0",
        "Coding Ratio (%)": "88.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Enterobacter hormaechei subsp. steigerwaltii",
                "strain": "strain=DSM 16691",
                "accession": "GCA_001729725.1",
                "taxid": 299766,
                "species_taxid": 158836,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.7885,
                "matched_fragments": 1370,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterobacter hormaechei subsp. oharae",
                "strain": "strain=FDAARGOS_1533",
                "accession": "GCA_020097195.1",
                "taxid": 301102,
                "species_taxid": 158836,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.5615,
                "matched_fragments": 1343,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterobacter hormaechei subsp. oharae",
                "strain": "strain=DSM 16687",
                "accession": "GCA_001729705.1",
                "taxid": 301102,
                "species_taxid": 158836,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.5482,
                "matched_fragments": 1345,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterobacter hormaechei subsp. xiangfangensis",
                "strain": "strain=LMG27195",
                "accession": "GCA_001729785.1",
                "taxid": 1296536,
                "species_taxid": 158836,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.1244,
                "matched_fragments": 1322,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterobacter hormaechei subsp. hoffmannii",
                "strain": "strain=DSM 14563",
                "accession": "GCA_001729745.1",
                "taxid": 1812934,
                "species_taxid": 158836,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.8977,
                "matched_fragments": 1327,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterobacter hormaechei",
                "strain": "strain=FDAARGOS 1433",
                "accession": "GCA_019048245.1",
                "taxid": 158836,
                "species_taxid": 158836,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 95.0787,
                "matched_fragments": 1305,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterobacter hormaechei subsp. hormaechei",
                "strain": "strain=ATCC 49162",
                "accession": "GCA_001875655.1",
                "taxid": 301105,
                "species_taxid": 158836,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.0578,
                "matched_fragments": 1308,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterobacter roggenkampii",
                "strain": "strain=DSM 16690",
                "accession": "GCA_024390995.1",
                "taxid": 1812935,
                "species_taxid": 1812935,
                "relation_to_type": "type",
                "validated": true,
                "ani": 88.4831,
                "matched_fragments": 1153,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter wuhouensis",
                "strain": "strain=WCHEW120002",
                "accession": "GCA_004331265.1",
                "taxid": 2529381,
                "species_taxid": 2529381,
                "relation_to_type": "type",
                "validated": true,
                "ani": 88.3373,
                "matched_fragments": 1250,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter sichuanensis",
                "strain": "strain=WCHECL1597",
                "accession": "GCA_025002605.1",
                "taxid": 2071710,
                "species_taxid": 2071710,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.7329,
                "matched_fragments": 1164,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter cloacae",
                "strain": "strain=DSM 30054",
                "accession": "GCA_021469225.1",
                "taxid": 550,
                "species_taxid": 550,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.5604,
                "matched_fragments": 1223,
                "total_fragments": 1472,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 98.96,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001729745.1",
                "gtdb_species": "s__Enterobacter hormaechei_A",
                "ani": 95.8966,
                "matched_fragments": 1327,
                "total_fragments": 1472,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.63",
                "min_intra_species_ani": "95.22",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 1867,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_011078175.1",
                "gtdb_species": "s__Enterobacter cloacae_Q",
                "ani": 95.0919,
                "matched_fragments": 1270,
                "total_fragments": 1472,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_001875655.1",
                "gtdb_species": "s__Enterobacter hormaechei",
                "ani": 95.0578,
                "matched_fragments": 1308,
                "total_fragments": 1472,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.46",
                "min_intra_species_ani": "98.52",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 32,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_900322725.1",
                "gtdb_species": "s__Enterobacter quasihormaechei",
                "ani": 93.601,
                "matched_fragments": 1285,
                "total_fragments": 1472,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.46",
                "min_intra_species_ani": "97.61",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 41,
                "status": "-"
            },
            {
                "accession": "GCF_013375935.1",
                "gtdb_species": "s__Enterobacter cloacae_O",
                "ani": 91.3551,
                "matched_fragments": 1283,
                "total_fragments": 1472,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.68",
                "min_intra_species_ani": "98.59",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCF_900324475.1",
                "gtdb_species": "s__Enterobacter bugandensis",
                "ani": 89.0152,
                "matched_fragments": 1226,
                "total_fragments": 1472,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.49",
                "min_intra_species_ani": "95.52",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 115,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 31.181,
        "optimum_tmp": 31.5,
        "optimum_ph": 5.75,
        "genome_size": 4862814.485,
        "gc_content": 55.35,
        "coding_genes": 4535.096,
        "rRNA16S_genes": 7.95,
        "tRNA_genes": 84.309,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.833,
        "range_salinity": 1.0,
        "facultative_respiration": 0.428,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.571,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Enterobacterales",
        "f__Enterobacteriaceae",
        "g__Enterobacter",
        "s__Enterobacter hormaechei_B"
    ],
    "_genome_taxon": [
        "uncultured",
        "Enterobacter",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Enterobacterales",
        "f__Enterobacteriaceae",
        "g__Enterobacter",
        "s__Enterobacter hormaechei_B",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Enterobacterales",
        "Enterobacteriaceae",
        "Enterobacter",
        "Enterobacter",
        "hormaechei",
        "B"
    ],
    "_meo": [
        {
            "id": "MEO_0000586",
            "label": "skin"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}