{ "type": "genome", "identifier": "GCA_943913995.1", "organism": "uncultured Acinetobacter sp.", "title": "uncultured Acinetobacter sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "NIH/NHGRI", "publication": [ {} ], "properties": { "assembly_accession": "GCA_943913995.1", "bioproject": "PRJEB47281", "biosample": "SAMEA110089424", "wgs_master": "CALUAI000000000.1", "refseq_category": "na", "taxid": "165433", "species_taxid": "165433", "organism_name": "uncultured Acinetobacter sp.", "infraspecific_name": "", "isolate": "UaKxzsL97M_bin.36.MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/06/14", "asm_name": "UaKxzsL97M_bin.36.MAG", "submitter": "NIH/NHGRI", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/913/995/GCA_943913995.1_UaKxzsL97M_bin.36.MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-06-14", "dateModified": "2022-06-14", "datePublished": "2022-06-14", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Acinetobacter sp." ], "sample_taxid": [ "165433" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA" ], "sample_host_location_id": [], "data_size": "0.641 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 69.51, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2207350", "Number of Sequences": "467", "Longest Sequences (bp)": "30297", "N50 (bp)": "5789", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "42.3", "Number of CDSs": "1777", "Average Protein Length": "286.0", "Coding Ratio (%)": "69.1", "Number of rRNAs": "0", "Number of tRNAs": "16", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Acinetobacter parvus", "strain": "strain=CIP 108168", "accession": "GCA_000368025.1", "taxid": 134533, "species_taxid": 134533, "relation_to_type": "type", "validated": true, "ani": 97.3794, "matched_fragments": 434, "total_fragments": 487, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter parvus", "strain": "strain=DSM 16617", "accession": "GCA_000248155.2", "taxid": 134533, "species_taxid": 134533, "relation_to_type": "type", "validated": true, "ani": 97.2924, "matched_fragments": 423, "total_fragments": 487, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acinetobacter modestus", "strain": "strain=CCM 8639", "accession": "GCA_014636095.1", "taxid": 1776740, "species_taxid": 1776740, "relation_to_type": "type", "validated": true, "ani": 84.8645, "matched_fragments": 383, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter junii", "strain": "strain=CIP 64.5", "accession": "GCA_000368765.1", "taxid": 40215, "species_taxid": 40215, "relation_to_type": "type", "validated": true, "ani": 83.3799, "matched_fragments": 340, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter junii", "strain": "strain=NCTC10307", "accession": "GCA_900444875.1", "taxid": 40215, "species_taxid": 40215, "relation_to_type": "type", "validated": true, "ani": 83.3299, "matched_fragments": 343, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter colistiniresistens", "strain": "strain=NIPH 2036", "accession": "GCA_000413935.1", "taxid": 280145, "species_taxid": 280145, "relation_to_type": "type", "validated": true, "ani": 82.7171, "matched_fragments": 379, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter courvalinii", "strain": "strain=CCUG 67960", "accession": "GCA_008802255.1", "taxid": 280147, "species_taxid": 280147, "relation_to_type": "type", "validated": true, "ani": 82.535, "matched_fragments": 358, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter vivianii", "strain": "strain=CCM 8642", "accession": "GCA_014635885.1", "taxid": 1776742, "species_taxid": 1776742, "relation_to_type": "type", "validated": true, "ani": 82.5231, "matched_fragments": 375, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter courvalinii", "strain": "strain=CCM 8635", "accession": "GCA_014635545.1", "taxid": 280147, "species_taxid": 280147, "relation_to_type": "type", "validated": true, "ani": 82.5088, "matched_fragments": 359, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter venetianus", "strain": "strain=RAG-1", "accession": "GCA_000271425.1", "taxid": 52133, "species_taxid": 52133, "relation_to_type": "type", "validated": true, "ani": 82.1978, "matched_fragments": 360, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=MTCC 9819", "accession": "GCA_000430205.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 82.021, "matched_fragments": 330, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=FDAARGOS_1392", "accession": "GCA_019355995.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 81.98, "matched_fragments": 336, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=CIP 64.3", "accession": "GCA_000369065.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 81.9729, "matched_fragments": 335, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=NCTC10305", "accession": "GCA_900444835.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 81.9422, "matched_fragments": 333, "total_fragments": 487, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter baumannii", "strain": "strain=PartI-Abaumannii-RM8376", "accession": "GCA_022870045.1", "taxid": 470, "species_taxid": 470, 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