{
    "type": "genome",
    "identifier": "GCA_944320125.1",
    "organism": "Alistipes finegoldii",
    "title": "Alistipes finegoldii",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Institut National pour la Recherche Agronomique (FRANCE)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_944320125.1",
        "bioproject": "PRJEB53581",
        "biosample": "SAMEA110134149",
        "wgs_master": "CALUGG000000000.1",
        "refseq_category": "na",
        "taxid": "214856",
        "species_taxid": "214856",
        "organism_name": "Alistipes finegoldii",
        "infraspecific_name": "",
        "isolate": "BRZ_EV__bin15",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/30",
        "asm_name": "BRZ_EV__bin15",
        "submitter": "Institut National pour la Recherche Agronomique (FRANCE)",
        "gbrs_paired_asm": "GCF_944320125.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/320/125/GCA_944320125.1_BRZ_EV_bin15",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-30",
    "dateModified": "2022-06-30",
    "datePublished": "2022-06-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Alistipes finegoldii"
        ],
        "sample_taxid": [
            "214856"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France"
        ],
        "sample_host_location_id": [],
        "data_size": "0.952 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3394605",
        "Number of Sequences": "5",
        "Longest Sequences (bp)": "1268374",
        "N50 (bp)": "1102988",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "58.3",
        "Number of CDSs": "2727",
        "Average Protein Length": "372.4",
        "Coding Ratio (%)": "89.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Alistipes finegoldii",
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                "accession": "GCA_000265365.1",
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                "species_taxid": 214856,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.586,
                "matched_fragments": 910,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Alistipes onderdonkii",
                "strain": "strain=DSM 19147",
                "accession": "GCA_025145285.1",
                "taxid": 328813,
                "species_taxid": 328813,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.9568,
                "matched_fragments": 713,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes onderdonkii",
                "strain": "strain=DSM 19147",
                "accession": "GCA_000374505.1",
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                "species_taxid": 328813,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.9492,
                "matched_fragments": 713,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes onderdonkii subsp. vulgaris",
                "strain": "strain=3BBH6",
                "accession": "GCA_006542645.1",
                "taxid": 2585117,
                "species_taxid": 328813,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.6132,
                "matched_fragments": 699,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes shahii",
                "strain": "strain=WAL 8301",
                "accession": "GCA_000210575.1",
                "taxid": 328814,
                "species_taxid": 328814,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 83.6895,
                "matched_fragments": 620,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes shahii",
                "strain": "strain=WAL 8301",
                "accession": "GCA_025145845.1",
                "taxid": 328814,
                "species_taxid": 328814,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 83.6292,
                "matched_fragments": 616,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes senegalensis",
                "strain": "strain=JC50",
                "accession": "GCA_025145645.1",
                "taxid": 1288121,
                "species_taxid": 1288121,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.5849,
                "matched_fragments": 602,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes timonensis",
                "strain": "strain=DSM 25383",
                "accession": "GCA_900107675.1",
                "taxid": 1465754,
                "species_taxid": 1465754,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.7739,
                "matched_fragments": 586,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes montrealensis",
                "strain": "strain=kh20",
                "accession": "GCA_018362775.1",
                "taxid": 2834113,
                "species_taxid": 2834113,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.1999,
                "matched_fragments": 598,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes ihumii",
                "strain": "strain=AP11",
                "accession": "GCA_025144665.1",
                "taxid": 1470347,
                "species_taxid": 1470347,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0851,
                "matched_fragments": 148,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCF_000265365.1",
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                "matched_fragments": 910,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.50",
                "min_intra_species_ani": "97.54",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 15,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000374505.1",
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                "matched_fragments": 713,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.63",
                "min_intra_species_ani": "96.86",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 44,
                "status": "-"
            },
            {
                "accession": "GCA_902388705.1",
                "gtdb_species": "s__Alistipes sp902388705",
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                "matched_fragments": 624,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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                "mean_intra_species_ani": "98.98",
                "min_intra_species_ani": "97.96",
                "mean_intra_species_af": "0.93",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_000210575.1",
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                "matched_fragments": 621,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
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                "min_intra_species_ani": "98.01",
                "mean_intra_species_af": "0.85",
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                "num_clustered_genomes": 20,
                "status": "-"
            },
            {
                "accession": "GCF_000312145.1",
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                "matched_fragments": 603,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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                "min_intra_species_ani": "97.35",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.66",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCF_900083545.1",
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                "matched_fragments": 610,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
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                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900541585.1",
                "gtdb_species": "s__Alistipes sp900541585",
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                "matched_fragments": 553,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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                "accession": "GCA_001941065.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_019119615.1",
                "gtdb_species": "s__Alistipes stercoravium",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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                "mean_intra_species_ani": "99.09",
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                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.438,
        "cell_length": -0.098,
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        "growth_tmp": 37.0,
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        "coding_genes": 3103.0,
        "rRNA16S_genes": 2.0,
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    "_gtdb_taxon": [
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        "c__Bacteroidia",
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        "g__Alistipes",
        "s__Alistipes finegoldii"
    ],
    "_genome_taxon": [
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        "finegoldii",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Rikenellaceae",
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        "s__Alistipes finegoldii",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Rikenellaceae",
        "Alistipes",
        "Alistipes",
        "finegoldii"
    ],
    "_meo": [
        {
            "id": "MEO_0000460",
            "label": "cecum"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}