{ "type": "genome", "identifier": "GCA_944320825.1", "organism": "Candidatus Phocaeicola excrementigallinarum", "title": "Candidatus Phocaeicola excrementigallinarum", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Institut National pour la Recherche Agronomique (FRANCE)", "publication": [ {} ], "properties": { "assembly_accession": "GCA_944320825.1", "bioproject": "PRJEB53581", "biosample": "SAMEA110134022", "wgs_master": "CALUIW000000000.1", "refseq_category": "na", "taxid": "2838730", "species_taxid": "2838730", "organism_name": "Candidatus Phocaeicola excrementigallinarum", "infraspecific_name": "", "isolate": "BRZ_LF__bin86", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/06/30", "asm_name": "BRZ_LF__bin86", "submitter": "Institut National pour la Recherche Agronomique (FRANCE)", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/320/825/GCA_944320825.1_BRZ_LF_bin86", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-06-30", "dateModified": "2022-06-30", "datePublished": "2022-06-30", "_annotation": { "sample_count": 1, "sample_organism": [ "Candidatus Phocaeicola excrementigallinarum" ], "sample_taxid": [ "2838730" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "France" ], "sample_host_location_id": [], "data_size": "0.823 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2864173", "Number of Sequences": "51", "Longest Sequences (bp)": "291171", "N50 (bp)": "87676", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "49.9", "Number of CDSs": "2335", "Average Protein Length": "363.7", "Coding Ratio (%)": "89.0", "Number of rRNAs": "0", "Number of tRNAs": "64", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Phocaeicola salanitronis", "strain": "strain=DSM 18170", "accession": "GCA_000190575.1", "taxid": 376805, "species_taxid": 376805, "relation_to_type": "type", "validated": true, "ani": 78.2905, "matched_fragments": 249, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phocaeicola intestinalis", "strain": "strain=Sa1CVN1", "accession": "GCA_014837065.1", "taxid": 2762212, "species_taxid": 2762212, "relation_to_type": "type", "validated": true, "ani": 78.2766, "matched_fragments": 224, "total_fragments": 928, "ani_threshold": 95, 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