{
    "type": "genome",
    "identifier": "GCA_944321365.1",
    "organism": "uncultured Paraprevotella sp.",
    "title": "uncultured Paraprevotella sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Institut National pour la Recherche Agronomique (FRANCE)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_944321365.1",
        "bioproject": "PRJEB53581",
        "biosample": "SAMEA110134001",
        "wgs_master": "CALULA000000000.1",
        "refseq_category": "na",
        "taxid": "910951",
        "species_taxid": "910951",
        "organism_name": "uncultured Paraprevotella sp.",
        "infraspecific_name": "",
        "isolate": "BRZ_PQ__bin90",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/30",
        "asm_name": "BRZ_PQ__bin90",
        "submitter": "Institut National pour la Recherche Agronomique (FRANCE)",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/321/365/GCA_944321365.1_BRZ_PQ_bin90",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-30",
    "dateModified": "2022-06-30",
    "datePublished": "2022-06-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Paraprevotella sp."
        ],
        "sample_taxid": [
            "910951"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France"
        ],
        "sample_host_location_id": [],
        "data_size": "0.781 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2735526",
        "Number of Sequences": "28",
        "Longest Sequences (bp)": "586755",
        "N50 (bp)": "141945",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "52.2",
        "Number of CDSs": "2112",
        "Average Protein Length": "386.2",
        "Coding Ratio (%)": "89.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Paraprevotella xylaniphila",
                "strain": "strain=YIT 11841",
                "accession": "GCA_000205165.1",
                "taxid": 454155,
                "species_taxid": 454155,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1115,
                "matched_fragments": 340,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraprevotella clara",
                "strain": "strain=YIT 11840",
                "accession": "GCA_000233955.1",
                "taxid": 454154,
                "species_taxid": 454154,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.102,
                "matched_fragments": 335,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides zoogleoformans",
                "strain": "strain=ATCC 33285",
                "accession": "GCA_007830715.1",
                "taxid": 28119,
                "species_taxid": 28119,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7693,
                "matched_fragments": 66,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides clarus",
                "strain": "strain=YIT 12056",
                "accession": "GCA_000195615.1",
                "taxid": 626929,
                "species_taxid": 626929,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7065,
                "matched_fragments": 58,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides clarus",
                "strain": "strain=YIT 12056",
                "accession": "GCA_900129655.1",
                "taxid": 626929,
                "species_taxid": 626929,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6671,
                "matched_fragments": 59,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides humanifaecis",
                "strain": "strain=KGMB07931",
                "accession": "GCA_017309675.2",
                "taxid": 2792859,
                "species_taxid": 2792859,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5748,
                "matched_fragments": 65,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides muris",
                "strain": "strain=KH365_2",
                "accession": "GCA_024704915.1",
                "taxid": 2937417,
                "species_taxid": 2937417,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4547,
                "matched_fragments": 50,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides stercoris",
                "strain": "strain=DSM 19555",
                "accession": "GCA_900106605.1",
                "taxid": 46506,
                "species_taxid": 46506,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.3564,
                "matched_fragments": 65,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides stercoris",
                "strain": "strain=ATCC 43183",
                "accession": "GCA_025147325.1",
                "taxid": 46506,
                "species_taxid": 46506,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.3309,
                "matched_fragments": 67,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides stercoris",
                "strain": "strain=ATCC 43183",
                "accession": "GCA_000154525.1",
                "taxid": 46506,
                "species_taxid": 46506,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.3266,
                "matched_fragments": 66,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Phocaeicola coprophilus",
                "strain": "strain=JCM 13818",
                "accession": "GCA_001315785.1",
                "taxid": 387090,
                "species_taxid": 387090,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.272,
                "matched_fragments": 57,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Phocaeicola coprophilus",
                "strain": "strain=DSM 18228",
                "accession": "GCA_000157915.1",
                "taxid": 387090,
                "species_taxid": 387090,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.256,
                "matched_fragments": 58,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Phocaeicola barnesiae",
                "strain": "strain=DSM 18169",
                "accession": "GCA_000374585.1",
                "taxid": 376804,
                "species_taxid": 376804,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2476,
                "matched_fragments": 62,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides gallinarum",
                "strain": "strain=DSM 18171",
                "accession": "GCA_000374365.1",
                "taxid": 376806,
                "species_taxid": 376806,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1734,
                "matched_fragments": 65,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides gallinarum",
                "strain": "strain=JCM 13658",
                "accession": "GCA_000613665.1",
                "taxid": 376806,
                "species_taxid": 376806,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1348,
                "matched_fragments": 63,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides propionicigenes",
                "strain": "strain=NSJ-90",
                "accession": "GCA_018390535.1",
                "taxid": 2834112,
                "species_taxid": 2834112,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1155,
                "matched_fragments": 53,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xylanibacter rodentium",
                "strain": "strain=PROD",
                "accession": "GCA_013166575.1",
                "taxid": 2736289,
                "species_taxid": 2736289,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0786,
                "matched_fragments": 53,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella dentalis",
                "strain": "strain=DSM 3688",
                "accession": "GCA_000242335.3",
                "taxid": 52227,
                "species_taxid": 52227,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7168,
                "matched_fragments": 66,
                "total_fragments": 899,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000205165.1",
                "gtdb_species": "s__Paraprevotella xylaniphila",
                "ani": 78.1115,
                "matched_fragments": 340,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.99",
                "min_intra_species_ani": "98.53",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_000233955.1",
                "gtdb_species": "s__Paraprevotella clara",
                "ani": 78.102,
                "matched_fragments": 335,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.73",
                "min_intra_species_ani": "97.27",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_910586505.1",
                "gtdb_species": "s__Paraprevotella sp910586505",
                "ani": 77.8386,
                "matched_fragments": 228,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900548345.1",
                "gtdb_species": "s__Paraprevotella sp900548345",
                "ani": 77.6045,
                "matched_fragments": 219,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900546665.1",
                "gtdb_species": "s__Paraprevotella stercorigallinarum",
                "ani": 77.3322,
                "matched_fragments": 127,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.24",
                "min_intra_species_ani": "99.20",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_003477995.1",
                "gtdb_species": "s__Paraprevotella sp003477995",
                "ani": 77.2573,
                "matched_fragments": 121,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.53",
                "min_intra_species_ani": "97.92",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900760455.1",
                "gtdb_species": "s__Paraprevotella sp900760455",
                "ani": 77.2038,
                "matched_fragments": 110,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.69",
                "min_intra_species_ani": "96.51",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_018883665.1",
                "gtdb_species": "s__Paraprevotella stercoravium",
                "ani": 77.098,
                "matched_fragments": 89,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905215575.1",
                "gtdb_species": "s__Paraprevotella sp905215575",
                "ani": 76.6462,
                "matched_fragments": 66,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Paraprevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004793475.1",
                "gtdb_species": "s__Bacteroides sp002491635",
                "ani": 76.4628,
                "matched_fragments": 54,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.51",
                "min_intra_species_ani": "98.46",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 13,
                "status": "-"
            },
            {
                "accession": "GCF_000374585.1",
                "gtdb_species": "s__Phocaeicola barnesiae",
                "ani": 76.3429,
                "matched_fragments": 64,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Phocaeicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.58",
                "min_intra_species_ani": "98.10",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_902362595.1",
                "gtdb_species": "s__Phocaeicola merdigallinarum",
                "ani": 76.2561,
                "matched_fragments": 74,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Phocaeicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.33",
                "min_intra_species_ani": "96.40",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_004558305.1",
                "gtdb_species": "s__Phocaeicola plebeius_B",
                "ani": 76.2287,
                "matched_fragments": 76,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Phocaeicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000374365.1",
                "gtdb_species": "s__Bacteroides gallinarum",
                "ani": 76.1734,
                "matched_fragments": 65,
                "total_fragments": 899,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.047,
        "cell_length": 0.175,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
        "optimum_ph": null,
        "genome_size": 4011668.0,
        "gc_content": 48.52,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Paraprevotella",
        "s__Paraprevotella sp944321365"
    ],
    "_genome_taxon": [
        "uncultured",
        "Paraprevotella",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Paraprevotella",
        "s__Paraprevotella sp944321365",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "Paraprevotella",
        "Paraprevotella",
        "sp944321365"
    ],
    "_meo": [
        {
            "id": "MEO_0000460",
            "label": "cecum"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}