{ "type": "genome", "identifier": "GCA_944321775.1", "organism": "Candidatus Alistipes excrementavium", "title": "Candidatus Alistipes excrementavium", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Institut National pour la Recherche Agronomique (FRANCE)", "publication": [ {} ], "properties": { "assembly_accession": "GCA_944321775.1", "bioproject": "PRJEB53581", "biosample": "SAMEA110134144", "wgs_master": "CALUMP000000000.1", "refseq_category": "na", "taxid": "2838435", "species_taxid": "2838435", "organism_name": "Candidatus Alistipes excrementavium", "infraspecific_name": "", "isolate": "BRZ_HR__bin38", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/06/30", "asm_name": "BRZ_HR__bin38", "submitter": "Institut National pour la Recherche Agronomique (FRANCE)", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/321/775/GCA_944321775.1_BRZ_HR_bin38", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-06-30", "dateModified": "2022-06-30", "datePublished": "2022-06-30", "_annotation": { "sample_count": 1, "sample_organism": [ "Candidatus Alistipes excrementavium" ], "sample_taxid": [ "2838435" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "France" ], "sample_host_location_id": [], "data_size": "0.770 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2735113", "Number of Sequences": "53", "Longest Sequences (bp)": "240030", "N50 (bp)": "113944", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "59.4", "Number of CDSs": "2262", "Average Protein Length": "321.4", "Coding Ratio (%)": "79.7", "Number of rRNAs": "0", "Number of tRNAs": "39", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Alistipes dispar", "strain": "strain=5CPEGH6", "accession": "GCA_006542685.1", "taxid": 2585119, "species_taxid": 2585119, "relation_to_type": "type", "validated": true, "ani": 81.7483, "matched_fragments": 445, "total_fragments": 885, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alistipes senegalensis", "strain": "strain=JC50", "accession": "GCA_025145645.1", "taxid": 1288121, "species_taxid": 1288121, "relation_to_type": "type", "validated": true, "ani": 80.815, "matched_fragments": 443, "total_fragments": 885, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alistipes communis", "strain": "strain=5CBH24", "accession": "GCA_006542665.1", "taxid": 2585118, "species_taxid": 2585118, "relation_to_type": "type", "validated": true, "ani": 80.6219, "matched_fragments": 384, "total_fragments": 885, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alistipes finegoldii", "strain": "strain=DSM 17242", "accession": "GCA_000265365.1", "taxid": 214856, "species_taxid": 214856, "relation_to_type": "type", "validated": true, "ani": 80.5981, "matched_fragments": 419, "total_fragments": 885, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alistipes shahii", "strain": "strain=WAL 8301", "accession": "GCA_025145845.1", "taxid": 328814, "species_taxid": 328814, "relation_to_type": "suspected-type", "validated": true, "ani": 80.5892, "matched_fragments": 457, "total_fragments": 885, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alistipes shahii", "strain": "strain=WAL 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