{
    "type": "genome",
    "identifier": "GCA_944324775.1",
    "organism": "Thomasclavelia spiroformis",
    "title": "Thomasclavelia spiroformis",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Institut National pour la Recherche Agronomique (FRANCE)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_944324775.1",
        "bioproject": "PRJEB53581",
        "biosample": "SAMEA110134565",
        "wgs_master": "CALUXP000000000.1",
        "refseq_category": "na",
        "taxid": "29348",
        "species_taxid": "29348",
        "organism_name": "Thomasclavelia spiroformis",
        "infraspecific_name": "",
        "isolate": "E08__bin340",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/30",
        "asm_name": "E08__bin340",
        "submitter": "Institut National pour la Recherche Agronomique (FRANCE)",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/324/775/GCA_944324775.1_E08_bin340",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-30",
    "dateModified": "2022-06-30",
    "datePublished": "2022-06-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Thomasclavelia spiroformis"
        ],
        "sample_taxid": [
            "29348"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France"
        ],
        "sample_host_location_id": [],
        "data_size": "0.649 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.46,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2318822",
        "Number of Sequences": "158",
        "Longest Sequences (bp)": "160742",
        "N50 (bp)": "28878",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "34.6",
        "Number of CDSs": "2214",
        "Average Protein Length": "298.9",
        "Coding Ratio (%)": "85.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Faecalibacillus faecis",
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                "species_taxid": 1982628,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacillus intestinalis",
                "strain": "strain=SNUG30099",
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                "species_taxid": 1982626,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Erysipelatoclostridium ramosum",
                "strain": "strain=DSM 1402",
                "accession": "GCA_014131695.1",
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                "relation_to_type": "type",
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                "ani": 77.9708,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] spiroforme",
                "strain": "strain=DSM 1552",
                "accession": "GCA_025149465.1",
                "taxid": 29348,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] spiroforme",
                "strain": "strain=DSM 1552",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] saccharogumia",
                "strain": "strain=DSM 17460",
                "accession": "GCA_000686665.1",
                "taxid": 341225,
                "species_taxid": 341225,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7633,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Erysipelatoclostridium ramosum",
                "strain": "",
                "accession": "GCA_900660185.1",
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                "species_taxid": 1547,
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                "ani": 77.7473,
                "matched_fragments": 128,
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                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] cocleatum",
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                "accession": "GCA_010206155.1",
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                "species_taxid": 69824,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] cocleatum",
                "strain": "strain=ATCC 29902",
                "accession": "GCA_002803405.1",
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                "species_taxid": 69824,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3963,
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                "status": "below_threshold"
            }
        ],
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            "contamination": 0.46,
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                "accession": "GCF_016901755.1",
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                "total_fragments": 700,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Faecalibacillus",
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                "status": "conclusive"
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            {
                "accession": "GCA_900544435.1",
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                "mean_intra_species_ani": "99.05",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Faecalibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.99",
                "min_intra_species_ani": "96.95",
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            },
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Faecalibacillus",
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                "min_intra_species_ani": "96.13",
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                "num_clustered_genomes": 51,
                "status": "-"
            },
            {
                "accession": "GCF_003480255.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__Faecalibacillus",
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            {
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            },
            {
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_902363625.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
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        "optimum_tmp": null,
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        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_gtdb_taxon": [
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        "p__Bacillota_I",
        "c__Bacilli_A",
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        "f__Coprobacillaceae",
        "g__Faecalibacillus",
        "s__Faecalibacillus spiroformis_A"
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    "_genome_taxon": [
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        "d__Bacteria",
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        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Coprobacillaceae",
        "g__Faecalibacillus",
        "s__Faecalibacillus spiroformis_A",
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        "Bacillota",
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        "Bacilli",
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        "Erysipelotrichales",
        "Coprobacillaceae",
        "Faecalibacillus",
        "Faecalibacillus",
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    ],
    "_meo": [
        {
            "id": "MEO_0000460",
            "label": "cecum"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}