{
    "type": "genome",
    "identifier": "GCA_944324985.1",
    "organism": "Candidatus Mailhella merdavium",
    "title": "Candidatus Mailhella merdavium",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Institut National pour la Recherche Agronomique (FRANCE)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_944324985.1",
        "bioproject": "PRJEB53581",
        "biosample": "SAMEA110134523",
        "wgs_master": "CALUYJ000000000.1",
        "refseq_category": "na",
        "taxid": "2838657",
        "species_taxid": "2838657",
        "organism_name": "Candidatus Mailhella merdavium",
        "infraspecific_name": "",
        "isolate": "E0_DP__bin128",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/30",
        "asm_name": "E0_DP__bin128",
        "submitter": "Institut National pour la Recherche Agronomique (FRANCE)",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/324/985/GCA_944324985.1_E0_DP_bin128",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-30",
    "dateModified": "2022-06-30",
    "datePublished": "2022-06-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Mailhella merdavium"
        ],
        "sample_taxid": [
            "2838657"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France"
        ],
        "sample_host_location_id": [],
        "data_size": "0.866 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3052048",
        "Number of Sequences": "36",
        "Longest Sequences (bp)": "407816",
        "N50 (bp)": "134793",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.4",
        "Number of CDSs": "2640",
        "Average Protein Length": "323.0",
        "Coding Ratio (%)": "83.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Mailhella massiliensis",
                "strain": "strain=Marseille-P3199",
                "accession": "GCA_900155525.1",
                "taxid": 1903261,
                "species_taxid": 1903261,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.844,
                "matched_fragments": 148,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfovibrio porci",
                "strain": "strain=PG-178-WT-4",
                "accession": "GCA_009696265.1",
                "taxid": 2605782,
                "species_taxid": 2605782,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1352,
                "matched_fragments": 78,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bilophila wadsworthia",
                "strain": "strain=ATCC 49260",
                "accession": "GCA_000701705.1",
                "taxid": 35833,
                "species_taxid": 35833,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9654,
                "matched_fragments": 76,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfovibrio piger",
                "strain": "strain=ATCC 29098",
                "accession": "GCA_000156375.1",
                "taxid": 901,
                "species_taxid": 901,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.8755,
                "matched_fragments": 81,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfovibrio intestinalis",
                "strain": "strain=DSM 11275",
                "accession": "GCA_014202345.1",
                "taxid": 58621,
                "species_taxid": 58621,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6651,
                "matched_fragments": 52,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cupidesulfovibrio termitidis",
                "strain": "strain=HI1",
                "accession": "GCA_000504305.1",
                "taxid": 42252,
                "species_taxid": 42252,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.652,
                "matched_fragments": 74,
                "total_fragments": 998,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_019119045.1",
                "gtdb_species": "s__Mailhella merdavium",
                "ani": 98.5146,
                "matched_fragments": 843,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_003150275.1",
                "gtdb_species": "s__Mailhella excrementigallinarum",
                "ani": 80.6283,
                "matched_fragments": 523,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.40",
                "min_intra_species_ani": "99.36",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_910579055.1",
                "gtdb_species": "s__Mailhella sp910579055",
                "ani": 79.7207,
                "matched_fragments": 433,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900541395.1",
                "gtdb_species": "s__Mailhella merdigallinarum",
                "ani": 78.3608,
                "matched_fragments": 152,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.42",
                "min_intra_species_ani": "99.13",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900553065.1",
                "gtdb_species": "s__Mailhella sp900553065",
                "ani": 78.0254,
                "matched_fragments": 102,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900155525.1",
                "gtdb_species": "s__Mailhella massiliensis",
                "ani": 77.8429,
                "matched_fragments": 148,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905187505.1",
                "gtdb_species": "s__Mailhella sp905187505",
                "ani": 77.6916,
                "matched_fragments": 131,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905192935.1",
                "gtdb_species": "s__Mailhella sp905192935",
                "ani": 77.1778,
                "matched_fragments": 96,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900770205.1",
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                "matched_fragments": 57,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Mailhella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_902373525.1",
                "gtdb_species": "s__Bilophila sp902373525",
                "ani": 77.0049,
                "matched_fragments": 89,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Bilophila",
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                "mean_intra_species_ani": "98.79",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_910575755.1",
                "gtdb_species": "s__Desulfovibrio sp910575755",
                "ani": 76.6945,
                "matched_fragments": 87,
                "total_fragments": 998,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Desulfovibrionia",
        "o__Desulfovibrionales",
        "f__Desulfovibrionaceae",
        "g__Mailhella",
        "s__Mailhella merdavium"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Mailhella",
        "merdavium",
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Desulfovibrionia",
        "o__Desulfovibrionales",
        "f__Desulfovibrionaceae",
        "g__Mailhella",
        "s__Mailhella merdavium",
        "Bacteria",
        "Desulfobacterota",
        "Desulfovibrionia",
        "Desulfovibrionales",
        "Desulfovibrionaceae",
        "Mailhella",
        "Mailhella",
        "merdavium"
    ],
    "_meo": [
        {
            "id": "MEO_0000460",
            "label": "cecum"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}