{
    "type": "genome",
    "identifier": "GCA_944376595.1",
    "organism": "Candidatus Dorea gallistercoris",
    "title": "Candidatus Dorea gallistercoris",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Institut National pour la Recherche Agronomique (FRANCE)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_944376595.1",
        "bioproject": "PRJEB53581",
        "biosample": "SAMEA110135411",
        "wgs_master": "CALWDD000000000.1",
        "refseq_category": "na",
        "taxid": "2838542",
        "species_taxid": "2838542",
        "organism_name": "Candidatus Dorea gallistercoris",
        "infraspecific_name": "",
        "isolate": "E0_FAY__bin137",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/30",
        "asm_name": "E0_FAY__bin137",
        "submitter": "Institut National pour la Recherche Agronomique (FRANCE)",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/376/595/GCA_944376595.1_E0_FAY_bin137",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-30",
    "dateModified": "2022-06-30",
    "datePublished": "2022-06-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Dorea gallistercoris"
        ],
        "sample_taxid": [
            "2838542"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France"
        ],
        "sample_host_location_id": [],
        "data_size": "0.763 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 99.54,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2677861",
        "Number of Sequences": "55",
        "Longest Sequences (bp)": "184114",
        "N50 (bp)": "74894",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "50.4",
        "Number of CDSs": "2563",
        "Average Protein Length": "313.9",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "strain": "strain=Marseille-P3756",
                "accession": "GCA_900312975.1",
                "taxid": 2086584,
                "species_taxid": 2086584,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.7501,
                "matched_fragments": 446,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Merdimonas faecis",
                "strain": "strain=BR31",
                "accession": "GCA_001754075.1",
                "taxid": 1653435,
                "species_taxid": 1653435,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2432,
                "matched_fragments": 225,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dorea phocaeensis",
                "strain": "strain=Marseille-P4003",
                "accession": "GCA_900240315.1",
                "taxid": 2040291,
                "species_taxid": 2040291,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9111,
                "matched_fragments": 112,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporofaciens musculi",
                "strain": "strain=WCA-9-b2",
                "accession": "GCA_009830285.1",
                "taxid": 2681861,
                "species_taxid": 2681861,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3947,
                "matched_fragments": 131,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Ruminococcus] gnavus",
                "strain": "strain=ATCC 29149",
                "accession": "GCA_002959615.1",
                "taxid": 33038,
                "species_taxid": 33038,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.9328,
                "matched_fragments": 71,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Ruminococcus] gnavus",
                "strain": "strain=ATCC 29149",
                "accession": "GCA_000169475.1",
                "taxid": 33038,
                "species_taxid": 33038,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.9272,
                "matched_fragments": 71,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Schaedlerella arabinosiphila",
                "strain": "strain=DSM 106076",
                "accession": "GCA_003885045.1",
                "taxid": 2044587,
                "species_taxid": 2044587,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9106,
                "matched_fragments": 115,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Suipraeoptans intestinalis",
                "strain": "strain=68-1-5",
                "accession": "GCA_009696485.1",
                "taxid": 2606628,
                "species_taxid": 2606628,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8434,
                "matched_fragments": 99,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Coprococcus comes",
                "strain": "strain=ATCC 27758",
                "accession": "GCA_025149785.1",
                "taxid": 410072,
                "species_taxid": 410072,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4312,
                "matched_fragments": 76,
                "total_fragments": 862,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 99.54,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_019114065.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Massilistercora",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_902406105.1",
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                "matched_fragments": 547,
                "total_fragments": 862,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Massilistercora",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900312975.1",
                "gtdb_species": "s__Massilistercora timonensis",
                "ani": 80.7585,
                "matched_fragments": 445,
                "total_fragments": 862,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Massilistercora",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.86",
                "min_intra_species_ani": "95.52",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_001754075.1",
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                "mean_intra_species_ani": "98.52",
                "min_intra_species_ani": "97.96",
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                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCF_016902415.1",
                "gtdb_species": "s__Merdimonas massiliensis",
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                "total_fragments": 862,
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                "mean_intra_species_ani": "97.93",
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                "status": "-"
            },
            {
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                "matched_fragments": 159,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
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                "mean_intra_species_ani": "98.89",
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            {
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                "total_fragments": 862,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Lachnoclostridium_B",
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            {
                "accession": "GCA_000433535.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
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            },
            {
                "accession": "GCA_910580235.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__UBA7109",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.199,
        "cell_length": 0.301,
        "doubling_h": null,
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        "gc_content": 40.912,
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        "rRNA16S_genes": null,
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        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
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        "bacillus_cell_shape": 1.0,
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    "_gtdb_taxon": [
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        "p__Bacillota_A",
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        "f__Lachnospiraceae",
        "g__Massilistercora",
        "s__Massilistercora gallistercoris"
    ],
    "_genome_taxon": [
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        "Dorea",
        "gallistercoris",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Massilistercora",
        "s__Massilistercora gallistercoris",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Massilistercora",
        "Massilistercora",
        "gallistercoris"
    ],
    "_meo": [
        {
            "id": "MEO_0000460",
            "label": "cecum"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}