{
    "type": "genome",
    "identifier": "GCA_944383705.1",
    "organism": "uncultured Clostridia bacterium",
    "title": "uncultured Clostridia bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Institut National pour la Recherche Agronomique (FRANCE)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_944383705.1",
        "bioproject": "PRJEB53581",
        "biosample": "SAMEA110135654",
        "wgs_master": "CALWQR000000000.1",
        "refseq_category": "na",
        "taxid": "244328",
        "species_taxid": "244328",
        "organism_name": "uncultured Clostridia bacterium",
        "infraspecific_name": "",
        "isolate": "BRZ_QS__bin85",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/30",
        "asm_name": "BRZ_QS__bin85",
        "submitter": "Institut National pour la Recherche Agronomique (FRANCE)",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/383/705/GCA_944383705.1_BRZ_QS_bin85",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-30",
    "dateModified": "2022-06-30",
    "datePublished": "2022-06-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Clostridia bacterium"
        ],
        "sample_taxid": [
            "244328"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France"
        ],
        "sample_host_location_id": [],
        "data_size": "0.611 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2179858",
        "Number of Sequences": "174",
        "Longest Sequences (bp)": "83983",
        "N50 (bp)": "17253",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.5",
        "Number of CDSs": "1795",
        "Average Protein Length": "339.3",
        "Coding Ratio (%)": "83.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900768535.1",
                "gtdb_species": "s__UMGS1865 sp900768535",
                "ani": 78.0211,
                "matched_fragments": 165,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900555785.1",
                "gtdb_species": "s__UMGS1865 sp900555785",
                "ani": 77.7139,
                "matched_fragments": 107,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.99",
                "min_intra_species_ani": "97.50",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.71",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002438075.1",
                "gtdb_species": "s__UMGS1865 sp002438075",
                "ani": 77.524,
                "matched_fragments": 133,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.71",
                "min_intra_species_ani": "99.71",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900547725.1",
                "gtdb_species": "s__UMGS1865 sp900547725",
                "ani": 77.3467,
                "matched_fragments": 109,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.94",
                "min_intra_species_ani": "97.81",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017507905.1",
                "gtdb_species": "s__UMGS1865 sp017507905",
                "ani": 76.9797,
                "matched_fragments": 110,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902795355.1",
                "gtdb_species": "s__UMGS1865 sp902795355",
                "ani": 76.8675,
                "matched_fragments": 109,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017379815.1",
                "gtdb_species": "s__UMGS1865 sp017379815",
                "ani": 76.8165,
                "matched_fragments": 80,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.29",
                "min_intra_species_ani": "98.29",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900769475.1",
                "gtdb_species": "s__UMGS1865 sp900769475",
                "ani": 76.7885,
                "matched_fragments": 99,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017453205.1",
                "gtdb_species": "s__UMGS1865 sp017453205",
                "ani": 76.6667,
                "matched_fragments": 55,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905187695.1",
                "gtdb_species": "s__Firm-07 sp905187695",
                "ani": 76.6615,
                "matched_fragments": 50,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__Firm-07",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017415805.1",
                "gtdb_species": "s__Firm-07 sp017415805",
                "ani": 76.5972,
                "matched_fragments": 70,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__Firm-07",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015064525.1",
                "gtdb_species": "s__UMGS1865 sp015064525",
                "ani": 76.5969,
                "matched_fragments": 92,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017452665.1",
                "gtdb_species": "s__UMGS1865 sp017452665",
                "ani": 76.4461,
                "matched_fragments": 64,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900548735.1",
                "gtdb_species": "s__Firm-07 sp900548735",
                "ani": 76.0472,
                "matched_fragments": 64,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__Firm-07",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.86",
                "min_intra_species_ani": "97.81",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_015063585.1",
                "gtdb_species": "s__UMGS1865 sp015063585",
                "ani": 76.0186,
                "matched_fragments": 55,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017463405.1",
                "gtdb_species": "s__UMGS1865 sp017463405",
                "ani": 75.8847,
                "matched_fragments": 68,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__UMGS1865",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015064005.1",
                "gtdb_species": "s__Firm-07 sp015064005",
                "ani": 75.8784,
                "matched_fragments": 72,
                "total_fragments": 638,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-272;g__Firm-07",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__CAG-272",
        "g__UMGS1865",
        "s__UMGS1865 sp944383705"
    ],
    "_genome_taxon": [
        "uncultured",
        "Clostridia",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__CAG-272",
        "g__UMGS1865",
        "s__UMGS1865 sp944383705",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "CAG-272",
        "UMGS1865",
        "UMGS1865",
        "sp944383705"
    ],
    "_meo": [
        {
            "id": "MEO_0000460",
            "label": "cecum"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}