{
    "type": "genome",
    "identifier": "GCA_944385855.1",
    "organism": "Candidatus Scatomorpha intestinigallinarum",
    "title": "Candidatus Scatomorpha intestinigallinarum",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Institut National pour la Recherche Agronomique (FRANCE)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_944385855.1",
        "bioproject": "PRJEB53581",
        "biosample": "SAMEA110135825",
        "wgs_master": "CALWYU000000000.1",
        "refseq_category": "na",
        "taxid": "2840923",
        "species_taxid": "2840923",
        "organism_name": "Candidatus Scatomorpha intestinigallinarum",
        "infraspecific_name": "",
        "isolate": "BRZ_FI__bin48",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/30",
        "asm_name": "BRZ_FI__bin48",
        "submitter": "Institut National pour la Recherche Agronomique (FRANCE)",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/385/855/GCA_944385855.1_BRZ_FI_bin48",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-30",
    "dateModified": "2022-06-30",
    "datePublished": "2022-06-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Scatomorpha intestinigallinarum"
        ],
        "sample_taxid": [
            "2840923"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France"
        ],
        "sample_host_location_id": [],
        "data_size": "0.723 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 94.79,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2563902",
        "Number of Sequences": "150",
        "Longest Sequences (bp)": "155700",
        "N50 (bp)": "27057",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.2",
        "Number of CDSs": "2362",
        "Average Protein Length": "319.0",
        "Coding Ratio (%)": "88.2",
        "Number of rRNAs": "1",
        "Number of tRNAs": "39",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Dysosmobacter acutus",
                "strain": "strain=MSJ-2",
                "accession": "GCA_018919205.1",
                "taxid": 2841504,
                "species_taxid": 2841504,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9913,
                "matched_fragments": 69,
                "total_fragments": 780,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudoflavonifractor gallinarum",
                "strain": "strain=DSM 107456",
                "accession": "GCA_014982855.1",
                "taxid": 2779352,
                "species_taxid": 2779352,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9546,
                "matched_fragments": 94,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Intestinimonas butyriciproducens",
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                "accession": "GCA_003096335.1",
                "taxid": 1297617,
                "species_taxid": 1297617,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8645,
                "matched_fragments": 50,
                "total_fragments": 780,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clostridium phoceensis",
                "strain": "strain=GD3",
                "accession": "GCA_001244495.1",
                "taxid": 1650661,
                "species_taxid": 1650661,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8004,
                "matched_fragments": 77,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dysosmobacter welbionis",
                "strain": "strain=J115",
                "accession": "GCA_005121165.3",
                "taxid": 2093857,
                "species_taxid": 2093857,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7298,
                "matched_fragments": 74,
                "total_fragments": 780,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporobacter termitidis",
                "strain": "strain=DSM 10068",
                "accession": "GCA_900130065.1",
                "taxid": 44749,
                "species_taxid": 44749,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2304,
                "matched_fragments": 64,
                "total_fragments": 780,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotruncus massiliensis",
                "strain": "strain=AT3",
                "accession": "GCA_900199635.1",
                "taxid": 1673720,
                "species_taxid": 1673720,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1016,
                "matched_fragments": 78,
                "total_fragments": 780,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vescimonas fastidiosa",
                "strain": "strain=MM35",
                "accession": "GCA_018326305.1",
                "taxid": 2714353,
                "species_taxid": 2714353,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9281,
                "matched_fragments": 53,
                "total_fragments": 780,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces olivochromogenes",
                "strain": "strain=DSM 40451",
                "accession": "GCA_001514115.1",
                "taxid": 1963,
                "species_taxid": 1963,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7409,
                "matched_fragments": 53,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 94.79,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900544295.1",
                "gtdb_species": "s__Scatomorpha intestinigallinarum",
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                "matched_fragments": 687,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Scatomorpha",
                "ani_circumscription_radius": 95.0,
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                "min_intra_species_ani": "98.73",
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            },
            {
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                "gtdb_species": "s__Scatomorpha sp900545405",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Scatomorpha",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900546485.1",
                "gtdb_species": "s__Scatomorpha sp900546485",
                "ani": 85.5067,
                "matched_fragments": 499,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Scatomorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_900752445.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Scatomorpha",
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                "status": "-"
            },
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Scatomorpha",
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            },
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                "mean_intra_species_ani": "N/A",
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            },
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                "accession": "GCA_900759385.1",
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            },
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                "accession": "GCA_900544765.1",
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                "matched_fragments": 291,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Scatomorpha",
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                "num_clustered_genomes": 3,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
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        "growth_tmp": null,
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": null,
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        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "f__Oscillospiraceae",
        "g__Scatomorpha",
        "s__Scatomorpha intestinigallinarum"
    ],
    "_genome_taxon": [
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        "Scatomorpha",
        "intestinigallinarum",
        "d__Bacteria",
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        "o__Oscillospirales",
        "f__Oscillospiraceae",
        "g__Scatomorpha",
        "s__Scatomorpha intestinigallinarum",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Oscillospiraceae",
        "Scatomorpha",
        "Scatomorpha",
        "intestinigallinarum"
    ],
    "_meo": [
        {
            "id": "MEO_0000460",
            "label": "cecum"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}