{ "type": "genome", "identifier": "GCA_944387765.1", "organism": "uncultured Oscillospiraceae bacterium", "title": "uncultured Oscillospiraceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Institut National pour la Recherche Agronomique (FRANCE)", "publication": [ {} ], "properties": { "assembly_accession": "GCA_944387765.1", "bioproject": "PRJEB53581", "biosample": "SAMEA110135790", "wgs_master": "CALXGB000000000.1", "refseq_category": "na", "taxid": "707003", "species_taxid": "707003", "organism_name": "uncultured Oscillospiraceae bacterium", "infraspecific_name": "", "isolate": "BRZ_MM__bin83", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/06/30", "asm_name": "BRZ_MM__bin83", "submitter": "Institut National pour la Recherche Agronomique (FRANCE)", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/944/387/765/GCA_944387765.1_BRZ_MM_bin83", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-06-30", "dateModified": "2022-06-30", "datePublished": "2022-06-30", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Oscillospiraceae bacterium" ], "sample_taxid": [ "707003" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "France" ], "sample_host_location_id": [], "data_size": "0.766 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 80.02, "contamination": 4.63, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2717773", "Number of Sequences": "100", "Longest Sequences (bp)": "148036", "N50 (bp)": "48455", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "59.9", "Number of CDSs": "2445", "Average Protein Length": "314.6", "Coding Ratio (%)": "84.9", "Number of rRNAs": "1", "Number of tRNAs": "51", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Clostridium phoceensis", "strain": "strain=GD3", "accession": "GCA_001244495.1", "taxid": 1650661, "species_taxid": 1650661, "relation_to_type": "type", "validated": true, "ani": 80.7034, "matched_fragments": 393, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoflavonifractor gallinarum", "strain": "strain=DSM 107456", "accession": "GCA_014982855.1", "taxid": 2779352, "species_taxid": 2779352, "relation_to_type": "type", "validated": true, "ani": 79.8998, "matched_fragments": 313, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavonifractor plautii", "strain": "strain=JCM 32125", "accession": "GCA_010508875.1", "taxid": 292800, "species_taxid": 292800, "relation_to_type": "suspected-type", "validated": true, "ani": 79.6412, "matched_fragments": 300, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavonifractor plautii", "strain": "strain=ATCC 29863", "accession": "GCA_000239295.1", "taxid": 292800, "species_taxid": 292800, "relation_to_type": "suspected-type", "validated": true, "ani": 79.6251, "matched_fragments": 292, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dysosmobacter welbionis", "strain": "strain=J115", "accession": "GCA_005121165.3", "taxid": 2093857, "species_taxid": 2093857, "relation_to_type": "type", "validated": true, "ani": 78.2794, "matched_fragments": 200, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Intestinimonas butyriciproducens", "strain": "strain=DSM 26588", "accession": "GCA_024622565.1", "taxid": 1297617, "species_taxid": 1297617, "relation_to_type": "type", "validated": true, "ani": 77.8562, "matched_fragments": 192, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Evtepia gabavorous", "strain": "strain=KLE1738", "accession": "GCA_003425665.1", "taxid": 2211183, "species_taxid": 2211183, "relation_to_type": "type", "validated": true, "ani": 77.7968, "matched_fragments": 160, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dysosmobacter acutus", "strain": "strain=MSJ-2", "accession": "GCA_018919205.1", "taxid": 2841504, "species_taxid": 2841504, "relation_to_type": "type", "validated": true, "ani": 77.7419, "matched_fragments": 158, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Intestinimonas butyriciproducens", "strain": "strain=DSM 26588", "accession": "GCA_003096335.1", "taxid": 1297617, "species_taxid": 1297617, "relation_to_type": "type", "validated": true, "ani": 77.722, "matched_fragments": 204, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vescimonas fastidiosa", "strain": "strain=MM35", "accession": "GCA_018326305.1", "taxid": 2714353, "species_taxid": 2714353, "relation_to_type": "type", "validated": true, "ani": 77.5516, "matched_fragments": 125, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vescimonas coprocola", "strain": "strain=MM50", "accession": "GCA_018408575.1", "taxid": 2714355, "species_taxid": 2714355, "relation_to_type": "type", "validated": true, "ani": 77.5209, "matched_fragments": 144, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Faecalibacterium duncaniae", "strain": "strain=JCM 31915", "accession": "GCA_010509575.1", "taxid": 411483, "species_taxid": 411483, "relation_to_type": "type", "validated": true, "ani": 77.231, "matched_fragments": 88, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillibacter faecalis", "strain": "strain=MM59", "accession": "GCA_018408705.1", "taxid": 2714358, "species_taxid": 2714358, "relation_to_type": "type", "validated": true, "ani": 77.2151, "matched_fragments": 120, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Faecalibacterium duncaniae", "strain": "strain=A2-165", "accession": "GCA_000162015.1", "taxid": 411483, "species_taxid": 411483, "relation_to_type": "type", "validated": true, "ani": 77.06, "matched_fragments": 90, "total_fragments": 855, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligaoa zhengdingensis", "strain": "strain=NSJ-31", "accession": "GCA_014384885.1", "taxid": 2763658, 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"Lawsonibacter", "sp900553135" ], "_meo": [ { "id": "MEO_0000460", "label": "cecum" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }