{
    "type": "genome",
    "identifier": "GCA_945616155.1",
    "organism": "uncultured Fibrobacter sp.",
    "title": "uncultured Fibrobacter sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_945616155.1",
        "bioproject": "PRJEB52635",
        "biosample": "SAMEA110321950",
        "wgs_master": "CALZBB000000000.1",
        "refseq_category": "na",
        "taxid": "261512",
        "species_taxid": "261512",
        "organism_name": "uncultured Fibrobacter sp.",
        "infraspecific_name": "",
        "isolate": "SRR14474043_bin.18_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/07/15",
        "asm_name": "SRR14474043_bin.18_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/616/155/GCA_945616155.1_SRR14474043_bin.18_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-07-15",
    "dateModified": "2022-07-15",
    "datePublished": "2022-07-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Fibrobacter sp."
        ],
        "sample_taxid": [
            "261512"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.838 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 72.92,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2947002",
        "Number of Sequences": "270",
        "Longest Sequences (bp)": "51768",
        "N50 (bp)": "14405",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.0",
        "Number of CDSs": "2365",
        "Average Protein Length": "334.9",
        "Coding Ratio (%)": "80.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Hallerella porci",
                "strain": "strain=UWS4",
                "accession": "GCA_003148885.1",
                "taxid": 1945871,
                "species_taxid": 1945871,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.1312,
                "matched_fragments": 315,
                "total_fragments": 851,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hallerella succinigenes",
                "strain": "strain=UWS3",
                "accession": "GCA_002797675.1",
                "taxid": 1896222,
                "species_taxid": 1896222,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.9064,
                "matched_fragments": 259,
                "total_fragments": 851,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fibrobacter succinogenes subsp. succinogenes",
                "strain": "strain=S85",
                "accession": "GCA_000146505.1",
                "taxid": 834,
                "species_taxid": 833,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2922,
                "matched_fragments": 86,
                "total_fragments": 851,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fibrobacter succinogenes subsp. succinogenes",
                "strain": "strain=S85",
                "accession": "GCA_000024665.1",
                "taxid": 834,
                "species_taxid": 833,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2118,
                "matched_fragments": 86,
                "total_fragments": 851,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 72.92,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_900167415.1",
                "gtdb_species": "s__Hallerella intestinalis",
                "ani": 97.8381,
                "matched_fragments": 733,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Hallerella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.54",
                "min_intra_species_ani": "97.77",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCF_003148885.1",
                "gtdb_species": "s__Hallerella porci",
                "ani": 80.114,
                "matched_fragments": 316,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Hallerella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.70",
                "min_intra_species_ani": "99.62",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_002797675.1",
                "gtdb_species": "s__Hallerella succinigenes",
                "ani": 79.9181,
                "matched_fragments": 258,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Hallerella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.45",
                "min_intra_species_ani": "98.31",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_900142475.1",
                "gtdb_species": "s__Fibrobacter sp900142475",
                "ani": 79.1038,
                "matched_fragments": 86,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.25",
                "min_intra_species_ani": "95.07",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_002210285.1",
                "gtdb_species": "s__Fibrobacter sp002210285",
                "ani": 78.9642,
                "matched_fragments": 86,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.84",
                "min_intra_species_ani": "95.65",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017642335.1",
                "gtdb_species": "s__Fibrobacter sp017642335",
                "ani": 78.8332,
                "matched_fragments": 95,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.30",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900143015.1",
                "gtdb_species": "s__Fibrobacter sp900143015",
                "ani": 78.7531,
                "matched_fragments": 68,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.36",
                "min_intra_species_ani": "97.36",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900177705.1",
                "gtdb_species": "s__Fibrobacter sp900177705",
                "ani": 78.5928,
                "matched_fragments": 87,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.87",
                "min_intra_species_ani": "99.82",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902800345.1",
                "gtdb_species": "s__Fibrobacter succinogenes_H",
                "ani": 78.414,
                "matched_fragments": 82,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017520105.1",
                "gtdb_species": "s__Fibrobacter sp017520105",
                "ani": 78.3998,
                "matched_fragments": 76,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.61",
                "min_intra_species_ani": "96.61",
                "mean_intra_species_af": "0.72",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902794535.1",
                "gtdb_species": "s__Fibrobacter succinogenes_O",
                "ani": 77.6154,
                "matched_fragments": 71,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017959225.1",
                "gtdb_species": "s__Hallerella sp017959225",
                "ani": 77.6021,
                "matched_fragments": 185,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Hallerella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002390045.1",
                "gtdb_species": "s__Hallerella sp002390045",
                "ani": 77.6,
                "matched_fragments": 180,
                "total_fragments": 851,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Hallerella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.56",
                "min_intra_species_ani": "98.06",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.31,
        "cell_length": -0.072,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
        "optimum_ph": null,
        "genome_size": 3549223.111,
        "gc_content": 48.062,
        "coding_genes": 3037.6,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 58.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Fibrobacterota",
        "c__Fibrobacteria",
        "o__Fibrobacterales",
        "f__Fibrobacteraceae",
        "g__Hallerella",
        "s__Hallerella intestinalis"
    ],
    "_genome_taxon": [
        "uncultured",
        "Fibrobacter",
        "sp.",
        "d__Bacteria",
        "p__Fibrobacterota",
        "c__Fibrobacteria",
        "o__Fibrobacterales",
        "f__Fibrobacteraceae",
        "g__Hallerella",
        "s__Hallerella intestinalis",
        "Bacteria",
        "Fibrobacterota",
        "Fibrobacteria",
        "Fibrobacterales",
        "Fibrobacteraceae",
        "Hallerella",
        "Hallerella",
        "intestinalis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}