{
    "type": "genome",
    "identifier": "GCA_945788085.1",
    "organism": "[Actinobacillus] rossii",
    "title": "[Actinobacillus] rossii",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_945788085.1",
        "bioproject": "PRJEB52516",
        "biosample": "SAMEA110341210",
        "wgs_master": "CALZKO000000000.1",
        "refseq_category": "na",
        "taxid": "123820",
        "species_taxid": "123820",
        "organism_name": "[Actinobacillus] rossii",
        "infraspecific_name": "",
        "isolate": "SRR3173844_bin.5_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/10",
        "asm_name": "SRR3173844_bin.5_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/788/085/GCA_945788085.1_SRR3173844_bin.5_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-10",
    "dateModified": "2022-09-10",
    "datePublished": "2022-09-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "[Actinobacillus] rossii"
        ],
        "sample_taxid": [
            "123820"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.435 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 35.19,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1527298",
        "Number of Sequences": "206",
        "Longest Sequences (bp)": "38548",
        "N50 (bp)": "9590",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.8",
        "Number of CDSs": "1321",
        "Average Protein Length": "302.5",
        "Coding Ratio (%)": "78.5",
        "Number of rRNAs": "1",
        "Number of tRNAs": "18",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Actinobacillus porcinus",
                "strain": "strain=NM319",
                "accession": "GCA_901764995.1",
                "taxid": 51048,
                "species_taxid": 51048,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.5918,
                "matched_fragments": 310,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinobacillus porcinus",
                "strain": "strain=NM319",
                "accession": "GCA_900773985.1",
                "taxid": 51048,
                "species_taxid": 51048,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.5918,
                "matched_fragments": 310,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pasteurella bettyae",
                "strain": "strain=CCUG 2042",
                "accession": "GCA_000262245.1",
                "taxid": 752,
                "species_taxid": 752,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.1473,
                "matched_fragments": 140,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pasteurella dagmatis",
                "strain": "strain=NCTC11617",
                "accession": "GCA_900186835.1",
                "taxid": 754,
                "species_taxid": 754,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9295,
                "matched_fragments": 108,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lonepinella koalarum",
                "strain": "strain=DSM 10053",
                "accession": "GCA_004339625.1",
                "taxid": 53417,
                "species_taxid": 53417,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9009,
                "matched_fragments": 129,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lonepinella koalarum",
                "strain": "strain=ATCC 700131",
                "accession": "GCA_004565475.1",
                "taxid": 53417,
                "species_taxid": 53417,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.898,
                "matched_fragments": 129,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pasteurella dagmatis",
                "strain": "strain=ATCC 43325",
                "accession": "GCA_000163475.1",
                "taxid": 754,
                "species_taxid": 754,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8859,
                "matched_fragments": 110,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Basfia succiniciproducens",
                "strain": "strain=JF4016",
                "accession": "GCA_011455875.1",
                "taxid": 653940,
                "species_taxid": 653940,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.5458,
                "matched_fragments": 101,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Volucribacter psittacicida",
                "strain": "strain=DSM 15534",
                "accession": "GCA_004339025.1",
                "taxid": 203482,
                "species_taxid": 203482,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1923,
                "matched_fragments": 82,
                "total_fragments": 408,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 35.19,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900444965.1",
                "gtdb_species": "s__Basfia_A rossii",
                "ani": 95.7111,
                "matched_fragments": 376,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Basfia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_901764995.1",
                "gtdb_species": "s__Basfia_A porcinus",
                "ani": 82.5918,
                "matched_fragments": 310,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Basfia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_003096995.1",
                "gtdb_species": "s__Basfia_A langaaensis",
                "ani": 79.1267,
                "matched_fragments": 238,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Basfia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000262245.1",
                "gtdb_species": "s__Basfia bettyae",
                "ani": 77.1473,
                "matched_fragments": 140,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Basfia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.65",
                "min_intra_species_ani": "97.30",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_014843355.1",
                "gtdb_species": "s__Basfia_A sp014843355",
                "ani": 76.9643,
                "matched_fragments": 104,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Basfia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900186835.1",
                "gtdb_species": "s__Pasteurella dagmatis",
                "ani": 76.9538,
                "matched_fragments": 107,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Pasteurella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.39",
                "min_intra_species_ani": "98.82",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_003352385.1",
                "gtdb_species": "s__Haemophilus haemolyticus_I",
                "ani": 76.9058,
                "matched_fragments": 108,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.71",
                "min_intra_species_ani": "95.22",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 17,
                "status": "-"
            },
            {
                "accession": "GCF_004565475.1",
                "gtdb_species": "s__Lonepinella koalarum",
                "ani": 76.898,
                "matched_fragments": 129,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Lonepinella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.41",
                "min_intra_species_ani": "98.83",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_001752465.1",
                "gtdb_species": "s__Haemophilus quentini",
                "ani": 76.8851,
                "matched_fragments": 113,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.94",
                "min_intra_species_ani": "99.85",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900454475.1",
                "gtdb_species": "s__Actinobacillus_B mairii",
                "ani": 76.8141,
                "matched_fragments": 95,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Actinobacillus_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004340985.1",
                "gtdb_species": "s__Cricetibacter osteomyelitidis",
                "ani": 76.4361,
                "matched_fragments": 83,
                "total_fragments": 408,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Cricetibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Enterobacterales",
        "f__Pasteurellaceae",
        "g__Basfia_A",
        "s__Basfia_A rossii"
    ],
    "_genome_taxon": [
        "[Actinobacillus]",
        "rossii",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Enterobacterales",
        "f__Pasteurellaceae",
        "g__Basfia_A",
        "s__Basfia_A rossii",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Enterobacterales",
        "Pasteurellaceae",
        "Basfia",
        "A",
        "Basfia",
        "A",
        "rossii"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}