{
    "type": "genome",
    "identifier": "GCA_945831665.1",
    "organism": "uncultured Fibrobacter sp.",
    "title": "uncultured Fibrobacter sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_945831665.1",
        "bioproject": "PRJEB52465",
        "biosample": "SAMEA110358496",
        "wgs_master": "CAMADI000000000.1",
        "refseq_category": "na",
        "taxid": "261512",
        "species_taxid": "261512",
        "organism_name": "uncultured Fibrobacter sp.",
        "infraspecific_name": "",
        "isolate": "SRR5976183_bin.40_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/12",
        "asm_name": "SRR5976183_bin.40_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/831/665/GCA_945831665.1_SRR5976183_bin.40_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-12",
    "dateModified": "2022-09-12",
    "datePublished": "2022-09-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Fibrobacter sp."
        ],
        "sample_taxid": [
            "261512"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.899 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3132628",
        "Number of Sequences": "192",
        "Longest Sequences (bp)": "78758",
        "N50 (bp)": "23330",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.5",
        "Number of CDSs": "2596",
        "Average Protein Length": "340.1",
        "Coding Ratio (%)": "84.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Hallerella succinigenes",
                "strain": "strain=UWS3",
                "accession": "GCA_002797675.1",
                "taxid": 1896222,
                "species_taxid": 1896222,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.9172,
                "matched_fragments": 201,
                "total_fragments": 944,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fibrobacter succinogenes subsp. succinogenes",
                "strain": "strain=S85",
                "accession": "GCA_000024665.1",
                "taxid": 834,
                "species_taxid": 833,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6667,
                "matched_fragments": 397,
                "total_fragments": 944,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fibrobacter succinogenes subsp. succinogenes",
                "strain": "strain=S85",
                "accession": "GCA_000146505.1",
                "taxid": 834,
                "species_taxid": 833,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.5512,
                "matched_fragments": 395,
                "total_fragments": 944,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hallerella porci",
                "strain": "strain=UWS4",
                "accession": "GCA_003148885.1",
                "taxid": 1945871,
                "species_taxid": 1945871,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.895,
                "matched_fragments": 81,
                "total_fragments": 944,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_900142475.1",
                "gtdb_species": "s__Fibrobacter sp900142475",
                "ani": 95.2284,
                "matched_fragments": 829,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.25",
                "min_intra_species_ani": "95.07",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_001603905.1",
                "gtdb_species": "s__Fibrobacter sp001603905",
                "ani": 91.756,
                "matched_fragments": 737,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.67",
                "min_intra_species_ani": "95.34",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_900177705.1",
                "gtdb_species": "s__Fibrobacter sp900177705",
                "ani": 86.3371,
                "matched_fragments": 633,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.87",
                "min_intra_species_ani": "99.82",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902756345.1",
                "gtdb_species": "s__Fibrobacter sp900142495",
                "ani": 86.2557,
                "matched_fragments": 653,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.15",
                "min_intra_species_ani": "97.22",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCF_002210295.1",
                "gtdb_species": "s__Fibrobacter sp002210295",
                "ani": 85.3518,
                "matched_fragments": 634,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900142545.1",
                "gtdb_species": "s__Fibrobacter sp900142545",
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                "matched_fragments": 639,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902799745.1",
                "gtdb_species": "s__Fibrobacter succinogenes_Q",
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                "matched_fragments": 588,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017526585.1",
                "gtdb_species": "s__Fibrobacter sp017526585",
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                "matched_fragments": 555,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902761355.1",
                "gtdb_species": "s__Fibrobacter succinogenes_M",
                "ani": 84.509,
                "matched_fragments": 566,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017530965.1",
                "gtdb_species": "s__Fibrobacter sp017530965",
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                "matched_fragments": 541,
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                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_016295375.1",
                "gtdb_species": "s__Fibrobacter sp016295375",
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                "matched_fragments": 330,
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                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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            {
                "accession": "GCF_900143055.1",
                "gtdb_species": "s__Fibrobacter sp900143055",
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                "matched_fragments": 503,
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                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
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                "mean_intra_species_af": "0.84",
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                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_902768325.1",
                "gtdb_species": "s__Fibrobacter succinogenes_A",
                "ani": 81.3547,
                "matched_fragments": 399,
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                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
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                "mean_intra_species_ani": "98.37",
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                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017615055.1",
                "gtdb_species": "s__Fibrobacter sp017615055",
                "ani": 80.1134,
                "matched_fragments": 380,
                "total_fragments": 944,
                "gtdb_taxonomy": "d__Bacteria;p__Fibrobacterota;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.31,
        "cell_length": -0.072,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
        "optimum_ph": null,
        "genome_size": 3549223.111,
        "gc_content": 48.062,
        "coding_genes": 3037.6,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 58.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Fibrobacterota",
        "c__Fibrobacteria",
        "o__Fibrobacterales",
        "f__Fibrobacteraceae",
        "g__Fibrobacter",
        "s__Fibrobacter sp946062555"
    ],
    "_genome_taxon": [
        "uncultured",
        "Fibrobacter",
        "sp.",
        "d__Bacteria",
        "p__Fibrobacterota",
        "c__Fibrobacteria",
        "o__Fibrobacterales",
        "f__Fibrobacteraceae",
        "g__Fibrobacter",
        "s__Fibrobacter sp946062555",
        "Bacteria",
        "Fibrobacterota",
        "Fibrobacteria",
        "Fibrobacterales",
        "Fibrobacteraceae",
        "Fibrobacter",
        "Fibrobacter",
        "sp946062555"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}