{ "type": "genome", "identifier": "GCA_945861645.1", "organism": "Opitutus sp. GAS368", "title": "Opitutus sp. GAS368", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_945861645.1", "bioproject": "PRJEB35640", "biosample": "SAMEA110379590", "wgs_master": "CAMAVZ000000000.1", "refseq_category": "na", "taxid": "1882749", "species_taxid": "1882749", "organism_name": "Opitutus sp. GAS368", "infraspecific_name": "", "isolate": "MaH-09apr19-128", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/09/09", "asm_name": "MaH-09apr19-128", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/861/645/GCA_945861645.1_MaH-09apr19-128", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-09-09", "dateModified": "2022-09-09", "datePublished": "2022-09-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Opitutus sp. GAS368" ], "sample_taxid": [ "1882749" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Italy" ], "sample_host_location_id": [], "data_size": "0.658 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2297630", "Number of Sequences": "116", "Longest Sequences (bp)": "141605", "N50 (bp)": "42774", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "57.0", "Number of CDSs": "1868", "Average Protein Length": "349.4", "Coding Ratio (%)": "85.2", "Number of rRNAs": "1", "Number of tRNAs": "39", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Nibricoccus aquaticus", "strain": "strain=HZ-65", "accession": 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"Verrucomicrobiota", "Verrucomicrobiae", "Opitutales", "Opitutaceae", "Lacunisphaera", "Lacunisphaera", "sp945861645" ], "_meo": [ { "id": "MEO_0000038", "label": "freshwater" }, { "id": "MEO_0000024", "label": "lake" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }