{ "type": "genome", "identifier": "GCA_945862035.1", "organism": "Opitutus sp. GAS368", "title": "Opitutus sp. GAS368", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_945862035.1", "bioproject": "PRJEB35640", "biosample": "SAMEA110379639", "wgs_master": "CAMAXB000000000.1", "refseq_category": "na", "taxid": "1882749", "species_taxid": "1882749", "organism_name": "Opitutus sp. GAS368", "infraspecific_name": "", "isolate": "ME-08apr19-328", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/09/09", "asm_name": "ME-08apr19-328", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/862/035/GCA_945862035.1_ME-08apr19-328", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-09-09", "dateModified": "2022-09-09", "datePublished": "2022-09-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Opitutus sp. GAS368" ], "sample_taxid": [ "1882749" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Czech Republic" ], "sample_host_location_id": [], "data_size": "0.801 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 85.42, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2850603", "Number of Sequences": "331", "Longest Sequences (bp)": "42698", "N50 (bp)": "10353", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "64.9", "Number of CDSs": "2254", "Average Protein Length": "320.7", "Coding Ratio (%)": "76.1", "Number of rRNAs": "0", "Number of tRNAs": "32", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Rariglobus hedericola", "strain": "strain=53C-WASEF", 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107709, "relation_to_type": "type", "validated": true, "ani": 77.2167, "matched_fragments": 146, "total_fragments": 802, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geminisphaera colitermitum", "strain": "strain=TAV2", "accession": "GCA_000171235.2", "taxid": 1148786, "species_taxid": 1148786, "relation_to_type": "type", "validated": true, "ani": 76.9381, "matched_fragments": 99, "total_fragments": 802, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ereboglobus luteus", "strain": "strain=Ho45", "accession": "GCA_003096195.1", "taxid": 1796921, "species_taxid": 1796921, "relation_to_type": "type", "validated": true, "ani": 76.889, "matched_fragments": 94, "total_fragments": 802, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nannocystis exedens", "strain": "strain=ATCC 25963", "accession": "GCA_900112715.1", "taxid": 54, "species_taxid": 54, "relation_to_type": "type", "validated": true, "ani": 74.7574, 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