{ "tc_result": [ { "organism_name": "Zwartia hollandica", "strain": "strain=LF4-65", "accession": "GCA_019923725.1", "taxid": 324606, "species_taxid": 324606, "relation_to_type": "type", "validated": true, "ani": 77.8821, "matched_fragments": 164, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sheuella amnicola", "strain": "strain=NBD-18", "accession": "GCA_010499255.1", "taxid": 2707330, "species_taxid": 2707330, "relation_to_type": "type", "validated": true, "ani": 77.5905, "matched_fragments": 106, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jezberella montanilacus", "strain": "strain=MWH-P2sevCIIIb", "accession": "GCA_003003055.1", "taxid": 323426, "species_taxid": 323426, "relation_to_type": "type", "validated": true, "ani": 77.3428, "matched_fragments": 78, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter piechaudii", "strain": "strain=LMG 1873", "accession": "GCA_902859685.1", "taxid": 72556, "species_taxid": 72556, "relation_to_type": "type", "validated": true, "ani": 77.0825, "matched_fragments": 53, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter piechaudii", "strain": "strain=NBRC 102461", "accession": "GCA_001571245.1", "taxid": 72556, "species_taxid": 72556, "relation_to_type": "type", "validated": true, "ani": 76.9477, "matched_fragments": 52, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter spanius", "strain": "strain=LMG 5911", "accession": "GCA_902859605.1", "taxid": 217203, "species_taxid": 217203, "relation_to_type": "suspected-type", "validated": true, "ani": 76.8093, "matched_fragments": 57, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter aestuarii", "strain": "strain=KS-M25", "accession": "GCA_009866805.1", "taxid": 2511204, "species_taxid": 2511204, "relation_to_type": "type", "validated": true, "ani": 76.806, "matched_fragments": 65, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter spanius", "strain": "strain=DSM 23806", "accession": "GCA_002812705.1", "taxid": 217203, "species_taxid": 217203, "relation_to_type": "suspected-type", "validated": true, "ani": 76.782, "matched_fragments": 58, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella avium", "strain": "strain=HAMBI_2160", "accession": "GCA_003350095.1", "taxid": 521, "species_taxid": 521, "relation_to_type": "type", "validated": true, "ani": 76.7359, "matched_fragments": 66, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella avium", "strain": "strain=ATCC 35086", "accession": "GCA_003581385.1", "taxid": 521, "species_taxid": 521, "relation_to_type": "type", "validated": true, "ani": 76.7008, "matched_fragments": 67, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella avium", "strain": "strain=NCTC12033", "accession": "GCA_900445835.1", "taxid": 521, "species_taxid": 521, "relation_to_type": "type", "validated": true, "ani": 76.6683, "matched_fragments": 68, "total_fragments": 847, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_002292845.1", "gtdb_species": "s__NBD-18 sp002292845", "ani": 91.0646, "matched_fragments": 538, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002737415.1", "gtdb_species": "s__NBD-18 sp002737415", "ani": 77.8047, "matched_fragments": 128, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013205565.1", "gtdb_species": "s__NBD-18 sp013205565", "ani": 77.7216, "matched_fragments": 117, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903958565.1", "gtdb_species": "s__NBD-18 sp903958565", "ani": 77.712, "matched_fragments": 139, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.16", "min_intra_species_ani": "98.92", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.85", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_010499255.1", "gtdb_species": "s__NBD-18 sp003507735", "ani": 77.6295, "matched_fragments": 104, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.47", "min_intra_species_ani": "99.47", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903847325.1", "gtdb_species": "s__NBD-18 sp903847325", "ani": 77.5398, "matched_fragments": 123, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903929925.1", "gtdb_species": "s__NBD-18 sp903929925", "ani": 77.4675, "matched_fragments": 113, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003600685.1", "gtdb_species": "s__Achromobacter spanius_B", "ani": 77.1976, "matched_fragments": 55, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.56", "min_intra_species_ani": "98.20", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_013116765.2", "gtdb_species": "s__Achromobacter deleyi_A", "ani": 77.1504, "matched_fragments": 54, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903865015.1", "gtdb_species": "s__NBD-18 sp903865015", "ani": 77.0494, "matched_fragments": 122, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903924715.1", "gtdb_species": "s__NBD-18 sp903924715", "ani": 77.0402, "matched_fragments": 76, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903903735.1", "gtdb_species": "s__NBD-18 sp903903735", "ani": 77.0179, "matched_fragments": 97, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001571245.1", "gtdb_species": "s__Achromobacter piechaudii", "ani": 76.9985, "matched_fragments": 51, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.00", "min_intra_species_ani": "98.18", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCA_903894155.1", "gtdb_species": "s__NBD-18 sp903894155", "ani": 76.8293, "matched_fragments": 90, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__NBD-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.08", "min_intra_species_ani": "98.85", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.83", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_900445835.1", "gtdb_species": "s__Bordetella avium", "ani": 76.7028, "matched_fragments": 67, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.81", "min_intra_species_ani": "99.47", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.95", "num_clustered_genomes": 26, "status": "-" }, { "accession": "GCF_900496965.1", "gtdb_species": "s__Achromobacter agilis", "ani": 76.64, "matched_fragments": 55, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002261355.1", "gtdb_species": "s__Bordetella sp002261355", "ani": 76.5733, "matched_fragments": 58, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013416405.1", "gtdb_species": "s__Pusillimonas_C sp013416405", "ani": 76.2354, "matched_fragments": 52, "total_fragments": 847, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }