{ "type": "genome", "identifier": "GCA_945862355.1", "organism": "Devosia equisanguinis", "title": "Devosia equisanguinis", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_945862355.1", "bioproject": "PRJEB35640", "biosample": "SAMEA110379722", "wgs_master": "CAMAYR000000000.1", "refseq_category": "na", "taxid": "2490941", "species_taxid": "2490941", "organism_name": "Devosia equisanguinis", "infraspecific_name": "", "isolate": "MH-08apr19-168", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/09/09", "asm_name": "MH-08apr19-168", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/862/355/GCA_945862355.1_MH-08apr19-168", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-09-09", "dateModified": "2022-09-09", "datePublished": "2022-09-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Devosia equisanguinis" ], "sample_taxid": [ "2490941" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Czech Republic" ], "sample_host_location_id": [], "data_size": "1.414 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence 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"Phreatobacter oligotrophus", "strain": "strain=DSM 25521", "accession": "GCA_003046185.1", "taxid": 1122261, "species_taxid": 1122261, "relation_to_type": "type", "validated": true, "ani": 76.6192, "matched_fragments": 182, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinarimonas rosea", "strain": "strain=DSM 21201", "accession": "GCA_000429045.1", "taxid": 552063, "species_taxid": 552063, "relation_to_type": "type", "validated": true, "ani": 76.5662, "matched_fragments": 203, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyphomicrobium denitrificans", "strain": "strain=ATCC 51888", "accession": "GCA_000143145.1", "taxid": 53399, "species_taxid": 53399, "relation_to_type": "type", "validated": true, "ani": 76.5344, "matched_fragments": 122, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chelatococcus composti", "strain": "strain=DSM 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"ani": 76.2762, "matched_fragments": 126, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium crusticola", "strain": "strain=KCTC 52305", "accession": "GCA_022179145.1", "taxid": 1697972, "species_taxid": 1697972, "relation_to_type": "type", "validated": true, "ani": 76.227, "matched_fragments": 213, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylorubrum podarium", "strain": "strain=DSM 15083", "accession": "GCA_022179745.1", "taxid": 200476, "species_taxid": 200476, "relation_to_type": "type", "validated": true, "ani": 76.206, "matched_fragments": 148, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium gregans", "strain": "strain=NBRC 103626", "accession": "GCA_022179245.1", "taxid": 374424, "species_taxid": 374424, "relation_to_type": "type", "validated": true, "ani": 76.2027, "matched_fragments": 167, 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"below_threshold" }, { "organism_name": "Rhodoligotrophos defluvii", "strain": "strain=lm1", "accession": "GCA_005281615.1", "taxid": 2561934, "species_taxid": 2561934, "relation_to_type": "type", "validated": true, "ani": 76.0418, "matched_fragments": 97, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amaricoccus solimangrovi", "strain": "strain=HB172011", "accession": "GCA_006385685.1", "taxid": 2589815, "species_taxid": 2589815, "relation_to_type": "type", "validated": true, "ani": 75.9938, "matched_fragments": 116, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas koreensis", "strain": "strain=NBRC 16723", "accession": "GCA_001598395.1", "taxid": 93064, "species_taxid": 93064, "relation_to_type": "type", "validated": true, "ani": 75.7971, "matched_fragments": 86, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas 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"gtdb_result": [ { "accession": "GCF_009708035.1", "gtdb_species": "s__Hyphomicrobium_A sp009708035", "ani": 77.6077, "matched_fragments": 199, "total_fragments": 1521, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Hyphomicrobium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900117445.1", "gtdb_species": "s__Hyphomicrobium_A sp900117445", "ani": 77.2324, "matched_fragments": 161, "total_fragments": 1521, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Hyphomicrobium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { 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