{ "tc_result": [ { "organism_name": "Candidatus Mycolicibacterium alkanivorans", "strain": "", "accession": "GCA_022760805.1", "taxid": 2954114, "species_taxid": 2954114, "relation_to_type": "type", "validated": true, "ani": 79.6173, "matched_fragments": 437, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium anyangense", "strain": "strain=JCM 30275", "accession": "GCA_010731855.1", "taxid": 1431246, "species_taxid": 1431246, "relation_to_type": "type", "validated": true, "ani": 79.3519, "matched_fragments": 517, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium aromaticivorans", "strain": "strain=JS19b1", "accession": "GCA_000559085.2", "taxid": 318425, "species_taxid": 318425, "relation_to_type": "type", "validated": true, "ani": 78.9796, "matched_fragments": 475, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium pallens", "strain": "strain=JCM 16370", "accession": "GCA_019456675.1", "taxid": 370524, "species_taxid": 370524, "relation_to_type": "type", "validated": true, "ani": 78.9498, "matched_fragments": 495, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium rhodesiae", "strain": "strain=DSM 44223", "accession": "GCA_002086695.1", "taxid": 36814, "species_taxid": 36814, "relation_to_type": "type", "validated": true, "ani": 78.867, "matched_fragments": 496, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium brumae", "strain": "strain=DSM 44177", "accession": "GCA_004014795.1", "taxid": 85968, "species_taxid": 85968, "relation_to_type": "type", "validated": true, "ani": 78.8637, "matched_fragments": 343, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fallax", "strain": "strain=DSM 44179", "accession": "GCA_002101995.1", "taxid": 1793, "species_taxid": 1793, "relation_to_type": "type", "validated": true, "ani": 78.8376, "matched_fragments": 413, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium crocinum", "strain": "strain=JCM 16369", "accession": "GCA_022370635.3", "taxid": 388459, "species_taxid": 388459, "relation_to_type": "type", "validated": true, "ani": 78.8093, "matched_fragments": 494, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fallax", "strain": "strain=JCM 6405", "accession": "GCA_010726955.1", "taxid": 1793, "species_taxid": 1793, "relation_to_type": "type", "validated": true, "ani": 78.7908, "matched_fragments": 417, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium vinylchloridicum", "strain": "strain=CECT 8761", "accession": "GCA_013404075.1", "taxid": 2736928, "species_taxid": 2736928, "relation_to_type": "type", "validated": true, "ani": 78.7803, "matched_fragments": 488, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium brumae", "strain": "strain=ATCC 51384", "accession": "GCA_025215495.1", "taxid": 85968, "species_taxid": 85968, "relation_to_type": "type", "validated": true, "ani": 78.7526, "matched_fragments": 358, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium chitae", "strain": "strain=NCTC10485", "accession": "GCA_900637205.1", "taxid": 1792, "species_taxid": 1792, "relation_to_type": "type", "validated": true, "ani": 78.7132, "matched_fragments": 429, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium chitae", "strain": "strain=JCM 12403", "accession": "GCA_010727725.1", "taxid": 1792, "species_taxid": 1792, "relation_to_type": "type", "validated": true, "ani": 78.6807, "matched_fragments": 423, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium sphagni", "strain": "strain=ATCC 33027", "accession": "GCA_002250655.1", "taxid": 1786, "species_taxid": 1786, "relation_to_type": "type", "validated": true, "ani": 78.6283, "matched_fragments": 479, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium palauense", "strain": "strain=CECT 8779", "accession": "GCA_002592005.1", "taxid": 2034511, "species_taxid": 2034511, "relation_to_type": "type", "validated": true, "ani": 78.5994, "matched_fragments": 442, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium thermoresistibile", "strain": "strain=ATCC 19527", "accession": "GCA_000234585.2", "taxid": 1797, "species_taxid": 1797, "relation_to_type": "type", "validated": true, "ani": 78.4977, "matched_fragments": 393, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacter longobardus", "strain": "strain=DSM 45394", "accession": "GCA_002102265.1", "taxid": 1108812, "species_taxid": 1108812, "relation_to_type": "type", "validated": true, "ani": 78.4837, "matched_fragments": 353, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium thermoresistibile", "strain": "strain=NCTC10409", "accession": "GCA_900187065.1", "taxid": 1797, "species_taxid": 1797, "relation_to_type": "type", "validated": true, "ani": 78.4762, "matched_fragments": 405, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium insubricum", "strain": "strain=JCM 16366", "accession": "GCA_010731615.1", "taxid": 444597, "species_taxid": 444597, "relation_to_type": "type", "validated": true, "ani": 78.4581, "matched_fragments": 408, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium thermoresistibile", "strain": "strain=JCM6362", "accession": "GCA_001570505.1", "taxid": 1797, "species_taxid": 1797, "relation_to_type": "type", "validated": true, "ani": 78.4476, "matched_fragments": 397, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium tokaiense", "strain": "strain=JCM 6373", "accession": "GCA_010725885.1", "taxid": 39695, "species_taxid": 39695, "relation_to_type": "suspected-type", "validated": true, "ani": 78.397, "matched_fragments": 403, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium tokaiense", "strain": "strain=NCTC10821", "accession": "GCA_900453365.1", "taxid": 39695, "species_taxid": 39695, "relation_to_type": "suspected-type", "validated": true, "ani": 78.3563, "matched_fragments": 413, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium neumannii", "strain": "strain=CECT 8766", "accession": "GCA_002245615.1", "taxid": 2048551, "species_taxid": 2048551, "relation_to_type": "type", "validated": true, "ani": 78.2924, "matched_fragments": 339, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacter senuensis", "strain": "strain=DSM 44999", "accession": "GCA_002101885.1", "taxid": 386913, "species_taxid": 386913, "relation_to_type": "type", "validated": true, "ani": 78.2752, "matched_fragments": 381, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium colombiense", "strain": "strain=CECT 3035", "accession": "GCA_000222105.4", "taxid": 339268, "species_taxid": 339268, "relation_to_type": "suspected-type", "validated": true, "ani": 78.1619, "matched_fragments": 384, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium colombiense", "strain": "strain=CECT 3035", "accession": "GCA_002105755.1", "taxid": 339268, "species_taxid": 339268, "relation_to_type": "suspected-type", "validated": true, "ani": 78.1556, "matched_fragments": 389, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium neoaurum", "strain": "strain=DSM 44074", "accession": "GCA_005670605.1", "taxid": 1795, "species_taxid": 1795, "relation_to_type": "type", "validated": true, "ani": 78.0935, "matched_fragments": 359, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium neoaurum", "strain": "strain=ATCC 25795", "accession": "GCA_000691525.1", "taxid": 1795, "species_taxid": 1795, "relation_to_type": "type", "validated": true, "ani": 78.0495, "matched_fragments": 356, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 91.67, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_903911165.1", "gtdb_species": "s__Mycobacterium sp903911165", "ani": 98.3868, "matched_fragments": 640, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_005789055.1", "gtdb_species": "s__Mycobacterium sp005789055", "ani": 90.5965, "matched_fragments": 411, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018401645.1", "gtdb_species": "s__Mycobacterium sp018401645", "ani": 83.051, "matched_fragments": 587, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016462945.1", "gtdb_species": "s__Mycobacterium sp016462945", "ani": 82.0582, "matched_fragments": 612, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017853185.1", "gtdb_species": "s__Mycobacterium sp017853185", "ani": 80.0812, "matched_fragments": 504, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903884065.1", "gtdb_species": "s__Mycobacterium sp903884065", "ani": 79.9478, "matched_fragments": 564, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.70", "min_intra_species_ani": "99.70", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001510415.1", "gtdb_species": "s__Mycobacterium sp001510415", "ani": 79.8254, "matched_fragments": 311, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903877095.1", "gtdb_species": "s__Mycobacterium sp903877095", "ani": 79.6528, "matched_fragments": 520, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.94", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.96", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_010731855.1", "gtdb_species": "s__Mycobacterium anyangense", "ani": 79.3611, "matched_fragments": 516, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005787665.1", "gtdb_species": "s__Mycobacterium sp005787665", "ani": 79.316, "matched_fragments": 399, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000230935.1", "gtdb_species": "s__Mycobacterium rhodesiae_B", "ani": 78.9091, "matched_fragments": 505, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002007745.1", "gtdb_species": "s__Mycobacterium litorale_A", "ani": 78.8797, "matched_fragments": 526, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001722335.1", "gtdb_species": "s__Mycobacterium flavescens_A", "ani": 78.577, "matched_fragments": 407, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018455725.1", "gtdb_species": "s__Mycobacterium sp018455725", "ani": 78.4684, "matched_fragments": 371, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900187065.1", "gtdb_species": "s__Mycobacterium thermoresistibile", "ani": 78.4472, "matched_fragments": 408, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.97", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_900637135.1", "gtdb_species": "s__Mycobacterium flavescens", "ani": 78.2769, "matched_fragments": 355, "total_fragments": 839, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.2034, "mean_intra_species_ani": "98.19", "min_intra_species_ani": "96.77", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.88", "num_clustered_genomes": 4, "status": "-" } ] }