{ "tc_result": [ { "organism_name": "Orrella marina", "strain": "strain=HZ20", "accession": "GCA_003058465.1", "taxid": 2163011, "species_taxid": 2163011, "relation_to_type": "type", "validated": true, "ani": 76.4596, "matched_fragments": 89, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter xylosoxidans", "strain": "strain=PartM-Axylosoxidans-RM8376", "accession": "GCA_022870085.1", "taxid": 85698, "species_taxid": 85698, "relation_to_type": "type", "validated": true, "ani": 76.437, "matched_fragments": 67, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella bronchialis", "strain": "strain=AU3182", "accession": "GCA_001676705.1", "taxid": 463025, "species_taxid": 463025, "relation_to_type": "type", "validated": true, "ani": 76.3898, "matched_fragments": 59, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella pseudohinzii", "strain": "strain=8-296-03", "accession": "GCA_000657795.2", "taxid": 1331258, "species_taxid": 1331258, "relation_to_type": "type", "validated": true, "ani": 76.3325, "matched_fragments": 67, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter animicus", "strain": "strain=LMG 26690", "accession": "GCA_902859585.1", "taxid": 1389935, "species_taxid": 1389935, "relation_to_type": "type", "validated": true, "ani": 76.2825, "matched_fragments": 60, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella hinzii", "strain": "strain=NCTC13199", "accession": "GCA_900637615.1", "taxid": 103855, "species_taxid": 103855, "relation_to_type": "type", "validated": true, "ani": 76.2739, "matched_fragments": 57, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter deleyi", "strain": "strain=LMG 3458", "accession": "GCA_902859705.1", "taxid": 1353891, "species_taxid": 1353891, "relation_to_type": "type", "validated": true, "ani": 76.2392, "matched_fragments": 75, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella hinzii", "strain": "strain=LMG 13501", "accession": "GCA_001548475.1", "taxid": 103855, "species_taxid": 103855, "relation_to_type": "type", "validated": true, "ani": 76.2237, "matched_fragments": 57, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter insolitus", "strain": "strain=NCTC 13520", "accession": "GCA_024168865.1", "taxid": 217204, "species_taxid": 217204, "relation_to_type": "type", "validated": true, "ani": 76.2146, "matched_fragments": 60, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter insolitus", "strain": "strain=LMG 6003", "accession": "GCA_002209555.1", "taxid": 217204, "species_taxid": 217204, "relation_to_type": "type", "validated": true, "ani": 76.1637, "matched_fragments": 61, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter insolitus", "strain": "strain=NCTC13520", "accession": "GCA_900637265.1", "taxid": 217204, "species_taxid": 217204, "relation_to_type": "type", "validated": true, "ani": 76.1637, "matched_fragments": 61, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter insolitus", "strain": "strain=LMG 6003", "accession": "GCA_902859615.1", "taxid": 217204, "species_taxid": 217204, "relation_to_type": "type", "validated": true, "ani": 76.1346, "matched_fragments": 61, "total_fragments": 893, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_007116135.1", "gtdb_species": "s__Algicoccus sp007116135", "ani": 77.0905, "matched_fragments": 145, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Algicoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002119665.1", "gtdb_species": "s__Bordetella_B sp002119665", "ani": 76.5064, "matched_fragments": 62, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000067205.1", "gtdb_species": "s__Bordetella_A petrii", "ani": 76.4652, "matched_fragments": 62, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003058465.1", "gtdb_species": "s__Algicoccus marinus", "ani": 76.4596, "matched_fragments": 89, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Algicoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013116765.2", "gtdb_species": "s__Achromobacter deleyi_A", "ani": 76.4338, "matched_fragments": 55, "total_fragments": 893, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.23", "min_intra_species_ani": "99.23", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002119685.1", "gtdb_species": "s__Bordetella_C sp002119685", "ani": 76.3814, "matched_fragments": 59, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000657795.2", "gtdb_species": "s__Bordetella pseudohinzii", "ani": 76.3325, "matched_fragments": 67, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.86", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.98", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_002261425.1", "gtdb_species": "s__Bordetella_C sp002261425", "ani": 76.2386, "matched_fragments": 65, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003600685.1", "gtdb_species": "s__Achromobacter spanius_B", "ani": 76.1886, "matched_fragments": 78, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.56", "min_intra_species_ani": "98.20", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_002209555.1", "gtdb_species": "s__Achromobacter insolitus", "ani": 76.1637, "matched_fragments": 61, "total_fragments": 893, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.13", "min_intra_species_ani": "98.86", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.89", "num_clustered_genomes": 17, "status": "-" }, { "accession": "GCF_000165835.1", "gtdb_species": "s__Achromobacter xylosoxidans_B", "ani": 76.1584, "matched_fragments": 61, "total_fragments": 893, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }