{
    "type": "genome",
    "identifier": "GCA_945877195.1",
    "organism": "Bacteroides fluxus",
    "title": "Bacteroides fluxus",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_945877195.1",
        "bioproject": "PRJEB52676",
        "biosample": "SAMEA110402063",
        "wgs_master": "CAMCRJ000000000.1",
        "refseq_category": "na",
        "taxid": "626930",
        "species_taxid": "626930",
        "organism_name": "Bacteroides fluxus",
        "infraspecific_name": "",
        "isolate": "ERR1855542_bin.37_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/10",
        "asm_name": "ERR1855542_bin.37_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/877/195/GCA_945877195.1_ERR1855542_bin.37_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-10",
    "dateModified": "2022-09-10",
    "datePublished": "2022-09-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroides fluxus"
        ],
        "sample_taxid": [
            "626930"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany"
        ],
        "sample_host_location_id": [],
        "data_size": "0.988 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 39.58,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3438318",
        "Number of Sequences": "139",
        "Longest Sequences (bp)": "191322",
        "N50 (bp)": "45567",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "47.4",
        "Number of CDSs": "2686",
        "Average Protein Length": "367.8",
        "Coding Ratio (%)": "86.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Bacteroides muris",
                "strain": "strain=KH365_2",
                "accession": "GCA_024704915.1",
                "taxid": 2937417,
                "species_taxid": 2937417,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0564,
                "matched_fragments": 412,
                "total_fragments": 1074,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides eggerthii",
                "strain": "strain=DSM 20697",
                "accession": "GCA_025146565.1",
                "taxid": 28111,
                "species_taxid": 28111,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.5878,
                "matched_fragments": 359,
                "total_fragments": 1074,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides caecimuris",
                "strain": "strain=I48",
                "accession": "GCA_023277905.1",
                "taxid": 1796613,
                "species_taxid": 1796613,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1568,
                "matched_fragments": 184,
                "total_fragments": 1074,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides thetaiotaomicron",
                "strain": "strain=VPI 5482",
                "accession": "GCA_022453665.1",
                "taxid": 818,
                "species_taxid": 818,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9657,
                "matched_fragments": 196,
                "total_fragments": 1074,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides ovatus",
                "strain": "strain=FDAARGOS_1516",
                "accession": "GCA_020149745.1",
                "taxid": 28116,
                "species_taxid": 28116,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.8606,
                "matched_fragments": 173,
                "total_fragments": 1074,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 39.58,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000195635.1",
                "gtdb_species": "s__Bacteroides fluxus",
                "ani": 99.1305,
                "matched_fragments": 772,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.66",
                "min_intra_species_ani": "99.32",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000614125.1",
                "gtdb_species": "s__Bacteroides rodentium",
                "ani": 81.1575,
                "matched_fragments": 445,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004793475.1",
                "gtdb_species": "s__Bacteroides sp002491635",
                "ani": 81.0835,
                "matched_fragments": 415,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.51",
                "min_intra_species_ani": "98.46",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 13,
                "status": "-"
            },
            {
                "accession": "GCA_905203765.1",
                "gtdb_species": "s__Bacteroides sp905203765",
                "ani": 79.8903,
                "matched_fragments": 273,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000155815.1",
                "gtdb_species": "s__Bacteroides eggerthii",
                "ani": 79.6036,
                "matched_fragments": 355,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.86",
                "min_intra_species_ani": "98.28",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 51,
                "status": "-"
            },
            {
                "accession": "GCF_900129655.1",
                "gtdb_species": "s__Bacteroides clarus",
                "ani": 79.5657,
                "matched_fragments": 351,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.75",
                "min_intra_species_ani": "98.47",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 18,
                "status": "-"
            },
            {
                "accession": "GCF_000374365.1",
                "gtdb_species": "s__Bacteroides gallinarum",
                "ani": 79.5106,
                "matched_fragments": 348,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_004342845.1",
                "gtdb_species": "s__Bacteroides heparinolyticus",
                "ani": 78.5576,
                "matched_fragments": 275,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.64",
                "min_intra_species_ani": "97.08",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.0,
        "cell_length": 0.0,
        "doubling_h": -0.095,
        "growth_tmp": 37.0,
        "optimum_tmp": 34.75,
        "optimum_ph": 7.0,
        "genome_size": 4330763.0,
        "gc_content": 45.57,
        "coding_genes": 3969.717,
        "rRNA16S_genes": 5.5,
        "tRNA_genes": 71.066,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Bacteroides",
        "s__Bacteroides fluxus"
    ],
    "_genome_taxon": [
        "Bacteroides",
        "fluxus",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Bacteroides",
        "s__Bacteroides fluxus",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "Bacteroides",
        "Bacteroides",
        "fluxus"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}