{
    "type": "genome",
    "identifier": "GCA_945879095.1",
    "organism": "Chitinophaga pinensis",
    "title": "Chitinophaga pinensis",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_945879095.1",
        "bioproject": "PRJEB35640",
        "biosample": "SAMEA110380523",
        "wgs_master": "CAMDVH000000000.1",
        "refseq_category": "na",
        "taxid": "79329",
        "species_taxid": "79329",
        "organism_name": "Chitinophaga pinensis",
        "infraspecific_name": "",
        "isolate": "TrH-25oct19-145",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/10",
        "asm_name": "TrH-25oct19-145",
        "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/879/095/GCA_945879095.1_TrH-25oct19-145",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-10",
    "dateModified": "2022-09-10",
    "datePublished": "2022-09-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chitinophaga pinensis"
        ],
        "sample_taxid": [
            "79329"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Austria"
        ],
        "sample_host_location_id": [],
        "data_size": "0.737 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 56.77,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2620707",
        "Number of Sequences": "404",
        "Longest Sequences (bp)": "27744",
        "N50 (bp)": "7194",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "33.8",
        "Number of CDSs": "1929",
        "Average Protein Length": "317.9",
        "Coding Ratio (%)": "70.2",
        "Number of rRNAs": "1",
        "Number of tRNAs": "13",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_000194605.1",
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                "species_taxid": 191579,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brumimicrobium aurantiacum",
                "strain": "strain=N62",
                "accession": "GCA_003402975.1",
                "taxid": 1737063,
                "species_taxid": 1737063,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brumimicrobium mesophilum",
                "strain": "strain=JCM 14063",
                "accession": "GCA_003025005.1",
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                "species_taxid": 392717,
                "relation_to_type": "type",
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                "ani": 75.8132,
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                "total_fragments": 711,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 56.77,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_903945495.1",
                "gtdb_species": "s__M0103 sp903945495",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__M0103",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 6,
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            },
            {
                "accession": "GCA_017984635.1",
                "gtdb_species": "s__M0103 sp017984635",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__M0103",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_903930085.1",
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                "matched_fragments": 114,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__M0103",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_018883325.1",
                "gtdb_species": "s__UBA952 sp018883325",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_000194605.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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        ]
    },
    "_bac2feature": {
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        "gc_content": 45.2,
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        "bacillus_cell_shape": 1.0,
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        "coccobacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
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        "f__Crocinitomicaceae",
        "g__M0103",
        "s__M0103 sp945902745"
    ],
    "_genome_taxon": [
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        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
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        "f__Crocinitomicaceae",
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        "s__M0103 sp945902745",
        "Bacteria",
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        "Bacteroidia",
        "Flavobacteriales",
        "Crocinitomicaceae",
        "M0103",
        "M0103",
        "sp945902745"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}