{ "type": "genome", "identifier": "GCA_945891635.1", "organism": "Sandarakinorhabdus limnophila DSM 17366", "title": "Sandarakinorhabdus limnophila DSM 17366", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_945891635.1", "bioproject": "PRJEB35640", "biosample": "SAMEA110379874", "wgs_master": "CAMDDM000000000.1", "refseq_category": "na", "taxid": "1123240", "species_taxid": "210512", "organism_name": "Sandarakinorhabdus limnophila DSM 17366", "infraspecific_name": "", "isolate": "MiE-16apr19-183", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/09/10", "asm_name": "MiE-16apr19-183", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/891/635/GCA_945891635.1_MiE-16apr19-183", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-09-10", "dateModified": "2022-09-10", "datePublished": "2022-09-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Sandarakinorhabdus limnophila DSM 17366" ], "sample_taxid": [ "1123240" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Czech Republic" ], "sample_host_location_id": [], "data_size": "0.583 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 91.67, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { 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"status": "below_threshold" }, { "organism_name": "Sandarakinorhabdus cyanobacteriorum", "strain": "strain=TH057", "accession": "GCA_002251755.1", "taxid": 1981098, "species_taxid": 1981098, "relation_to_type": "type", "validated": true, "ani": 83.4745, "matched_fragments": 520, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sandarakinorhabdus rubra", "strain": "strain=MO-4", "accession": "GCA_010994245.1", "taxid": 2672568, "species_taxid": 2672568, "relation_to_type": "type", "validated": true, "ani": 82.7553, "matched_fragments": 406, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polymorphobacter fuscus", "strain": "strain=DSM 105347", "accession": "GCA_011927825.1", "taxid": 1439888, "species_taxid": 1439888, "relation_to_type": "type", "validated": true, "ani": 78.4324, "matched_fragments": 296, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polymorphobacter multimanifer", "strain": "strain=DSM 102189", "accession": "GCA_014205635.1", "taxid": 1070431, "species_taxid": 1070431, "relation_to_type": "type", "validated": true, "ani": 77.8915, "matched_fragments": 273, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas changnyeongensis", "strain": "strain=C33", "accession": "GCA_009913435.1", "taxid": 2698679, "species_taxid": 2698679, "relation_to_type": "type", "validated": true, "ani": 77.1409, "matched_fragments": 179, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas morindae", "strain": "strain=NBD5", "accession": "GCA_023822065.1", "taxid": 1541170, "species_taxid": 1541170, "relation_to_type": "type", "validated": true, "ani": 77.112, "matched_fragments": 163, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas oleivorans", "strain": "strain=FW-11", "accession": "GCA_003050615.1", "taxid": 1735121, "species_taxid": 1735121, "relation_to_type": "type", "validated": true, "ani": 76.8374, "matched_fragments": 142, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas hylomeconis", "strain": "strain=CCTCC AB 2013304", "accession": "GCA_025370105.1", "taxid": 1395958, "species_taxid": 1395958, "relation_to_type": "type", "validated": true, "ani": 76.7973, "matched_fragments": 146, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas alpina", "strain": "strain=DSM 22537", "accession": "GCA_025370095.1", "taxid": 653931, "species_taxid": 653931, "relation_to_type": "type", "validated": true, "ani": 76.7405, "matched_fragments": 130, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedomonas mirosovicensis", "strain": "strain=A1X5R2", "accession": "GCA_022569295.1", "taxid": 2908641, "species_taxid": 2908641, "relation_to_type": "type", "validated": true, "ani": 76.7062, "matched_fragments": 104, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas folli", "strain": "strain=RHCKR7", "accession": "GCA_019429525.1", "taxid": 2862497, "species_taxid": 2862497, "relation_to_type": "type", "validated": true, "ani": 76.6171, "matched_fragments": 128, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blastochloris sulfoviridis", "strain": "strain=DSM 729", "accession": "GCA_008630065.1", "taxid": 50712, "species_taxid": 50712, "relation_to_type": "type", "validated": true, "ani": 75.9504, "matched_fragments": 89, "total_fragments": 613, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 91.67, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000420765.1", 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