{
    "type": "genome",
    "identifier": "GCA_945901985.1",
    "organism": "Thermoflexus hugenholtzii JAD2",
    "title": "Thermoflexus hugenholtzii JAD2",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_945901985.1",
        "bioproject": "PRJEB35640",
        "biosample": "SAMEA110380129",
        "wgs_master": "CAMDMP000000000.1",
        "refseq_category": "na",
        "taxid": "877466",
        "species_taxid": "1495650",
        "organism_name": "Thermoflexus hugenholtzii JAD2",
        "infraspecific_name": "",
        "isolate": "MoH-23oct19-89",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/10",
        "asm_name": "MoH-23oct19-89",
        "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/945/901/985/GCA_945901985.1_MoH-23oct19-89",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-10",
    "dateModified": "2022-09-10",
    "datePublished": "2022-09-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Thermoflexus hugenholtzii JAD2"
        ],
        "sample_taxid": [
            "877466"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Austria"
        ],
        "sample_host_location_id": [],
        "data_size": "0.525 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 1.04,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1901893",
        "Number of Sequences": "58",
        "Longest Sequences (bp)": "175203",
        "N50 (bp)": "63129",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "67.6",
        "Number of CDSs": "1862",
        "Average Protein Length": "295.9",
        "Coding Ratio (%)": "86.9",
        "Number of rRNAs": "3",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Paraconexibacter algicola",
                "strain": "strain=Seoho-28",
                "accession": "GCA_003044185.1",
                "taxid": 2133960,
                "species_taxid": 2133960,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 69,
                "total_fragments": 610,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solirubrobacter pauli",
                "strain": "strain=DSM 14954",
                "accession": "GCA_003633755.1",
                "taxid": 166793,
                "species_taxid": 166793,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2127,
                "matched_fragments": 67,
                "total_fragments": 610,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas oligotrophica",
                "strain": "strain=DSM 24482",
                "accession": "GCA_013409875.1",
                "taxid": 931536,
                "species_taxid": 931536,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0976,
                "matched_fragments": 55,
                "total_fragments": 610,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 1.04,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_003670575.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__RH-chloro-G1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_003670735.1",
                "gtdb_species": "s__RH-chloro-G1 sp003670735",
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                "matched_fragments": 181,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__RH-chloro-G1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016875695.1",
                "gtdb_species": "s__SHYP01 sp016875695",
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                "matched_fragments": 178,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__SHYP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009692725.1",
                "gtdb_species": "s__SHYP01 sp009692725",
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                "matched_fragments": 143,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__SHYP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009839925.1",
                "gtdb_species": "s__VXMT01 sp009839925",
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                "matched_fragments": 150,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__VXMT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009840945.1",
                "gtdb_species": "s__VXMT01 sp009840945",
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                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__VXMT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009692765.1",
                "gtdb_species": "s__SHYQ01 sp009692765",
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                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__SHYQ01",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
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                "total_fragments": 610,
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                "mean_intra_species_ani": "96.91",
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                "status": "-"
            },
            {
                "accession": "GCA_016875635.1",
                "gtdb_species": "s__SURF-43 sp016875635",
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                "matched_fragments": 114,
                "total_fragments": 610,
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_009692705.1",
                "gtdb_species": "s__SHYR01 sp009692705",
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                "matched_fragments": 118,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__SHYR01",
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                "accession": "GCA_903917615.1",
                "gtdb_species": "s__SHYQ01 sp903917615",
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                "total_fragments": 610,
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_009837285.1",
                "gtdb_species": "s__VXMT01 sp009837285",
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                "matched_fragments": 152,
                "total_fragments": 610,
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                "mean_intra_species_ani": "95.62",
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                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_009843585.1",
                "gtdb_species": "s__VYDC01 sp009843585",
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                "matched_fragments": 86,
                "total_fragments": 610,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__VYDC01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Dehalococcoidia",
        "o__UBA2979",
        "f__UBA2979",
        "g__RH-chloro-G1",
        "s__RH-chloro-G1 sp003670575"
    ],
    "_genome_taxon": [
        "Thermoflexus",
        "hugenholtzii",
        "JAD2",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Dehalococcoidia",
        "o__UBA2979",
        "f__UBA2979",
        "g__RH-chloro-G1",
        "s__RH-chloro-G1 sp003670575",
        "Bacteria",
        "Chloroflexota",
        "Dehalococcoidia",
        "UBA2979",
        "UBA2979",
        "RH-chloro-G1",
        "RH-chloro-G1",
        "sp003670575"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}