{
    "type": "genome",
    "identifier": "GCA_946409995.1",
    "organism": "uncultured Prevotella sp.",
    "title": "uncultured Prevotella sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_946409995.1",
        "bioproject": "PRJEB54748",
        "biosample": "SAMEA110643316",
        "wgs_master": "CAMJYR000000000.1",
        "refseq_category": "na",
        "taxid": "159272",
        "species_taxid": "159272",
        "organism_name": "uncultured Prevotella sp.",
        "infraspecific_name": "",
        "isolate": "SRR12081296_bin.12_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/15",
        "asm_name": "SRR12081296_bin.12_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/946/409/995/GCA_946409995.1_SRR12081296_bin.12_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-15",
    "dateModified": "2022-09-15",
    "datePublished": "2022-09-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Prevotella sp."
        ],
        "sample_taxid": [
            "159272"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.788 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 59.09,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2742925",
        "Number of Sequences": "271",
        "Longest Sequences (bp)": "47357",
        "N50 (bp)": "13984",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.8",
        "Number of CDSs": "1956",
        "Average Protein Length": "376.1",
        "Coding Ratio (%)": "80.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "18",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Prevotella ruminicola",
                "strain": "strain=Bryant 23",
                "accession": "GCA_000025925.1",
                "taxid": 839,
                "species_taxid": 839,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2048,
                "matched_fragments": 205,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella ruminicola",
                "strain": "strain=ATCC 19189",
                "accession": "GCA_900108375.1",
                "taxid": 839,
                "species_taxid": 839,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1974,
                "matched_fragments": 208,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella brevis",
                "strain": "strain=ATCC 19188",
                "accession": "GCA_000621725.1",
                "taxid": 83231,
                "species_taxid": 83231,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.823,
                "matched_fragments": 127,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_009495405.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.0698,
                "matched_fragments": 55,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_025151535.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.0541,
                "matched_fragments": 54,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_000157935.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.0541,
                "matched_fragments": 54,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella buccae",
                "strain": "strain=ATCC 33574",
                "accession": "GCA_000184945.1",
                "taxid": 28126,
                "species_taxid": 28126,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0475,
                "matched_fragments": 72,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella mizrahii",
                "strain": "strain=LKV-178-WT-2A",
                "accession": "GCA_009695775.1",
                "taxid": 2606637,
                "species_taxid": 2606637,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8943,
                "matched_fragments": 56,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella baroniae",
                "strain": "strain=DSM 16972",
                "accession": "GCA_000426585.1",
                "taxid": 305719,
                "species_taxid": 305719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4044,
                "matched_fragments": 57,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella baroniae",
                "strain": "strain=JCM 13447",
                "accession": "GCA_000613565.1",
                "taxid": 305719,
                "species_taxid": 305719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.375,
                "matched_fragments": 56,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 59.09,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900320905.1",
                "gtdb_species": "s__Prevotella sp900320905",
                "ani": 97.9045,
                "matched_fragments": 607,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.08",
                "min_intra_species_ani": "98.15",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017518935.1",
                "gtdb_species": "s__Prevotella sp017518935",
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                "matched_fragments": 477,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017964785.1",
                "gtdb_species": "s__Prevotella sp017964785",
                "ani": 87.819,
                "matched_fragments": 501,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017551005.1",
                "gtdb_species": "s__Prevotella sp017551005",
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                "matched_fragments": 467,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902784565.1",
                "gtdb_species": "s__Prevotella sp902784565",
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                "matched_fragments": 465,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.90",
                "min_intra_species_ani": "96.90",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_905233555.1",
                "gtdb_species": "s__Prevotella sp905233555",
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                "matched_fragments": 487,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_017618275.1",
                "gtdb_species": "s__Prevotella sp017618275",
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                "matched_fragments": 508,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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            },
            {
                "accession": "GCA_017965725.1",
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                "matched_fragments": 418,
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_902763615.1",
                "gtdb_species": "s__Prevotella sp902763615",
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            },
            {
                "accession": "GCA_017428805.1",
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                "matched_fragments": 275,
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_900314995.1",
                "gtdb_species": "s__Prevotella sp900314995",
                "ani": 78.4671,
                "matched_fragments": 287,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "mean_intra_species_ani": "97.11",
                "min_intra_species_ani": "96.50",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 11,
                "status": "-"
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.226,
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        "doubling_h": null,
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        "coding_genes": 2508.172,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 50.875,
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        "bacillus_cell_shape": 0.975,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
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        "g__Prevotella",
        "s__Prevotella sp900320905"
    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
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        "s__Prevotella sp900320905",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "Prevotella",
        "Prevotella",
        "sp900320905"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}