{
    "type": "genome",
    "identifier": "GCA_946412075.1",
    "organism": "uncultured Prevotella sp.",
    "title": "uncultured Prevotella sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_946412075.1",
        "bioproject": "PRJEB54957",
        "biosample": "SAMEA110653526",
        "wgs_master": "CAMKGF000000000.1",
        "refseq_category": "na",
        "taxid": "159272",
        "species_taxid": "159272",
        "organism_name": "uncultured Prevotella sp.",
        "infraspecific_name": "",
        "isolate": "SRR14812340_bin.24_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/12",
        "asm_name": "SRR14812340_bin.24_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/946/412/075/GCA_946412075.1_SRR14812340_bin.24_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-12",
    "dateModified": "2022-09-12",
    "datePublished": "2022-09-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Prevotella sp."
        ],
        "sample_taxid": [
            "159272"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.915 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3179904",
        "Number of Sequences": "87",
        "Longest Sequences (bp)": "229642",
        "N50 (bp)": "55363",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.3",
        "Number of CDSs": "2493",
        "Average Protein Length": "360.0",
        "Coding Ratio (%)": "84.7",
        "Number of rRNAs": "1",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Prevotella mizrahii",
                "strain": "strain=LKV-178-WT-2A",
                "accession": "GCA_009695775.1",
                "taxid": 2606637,
                "species_taxid": 2606637,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.5501,
                "matched_fragments": 210,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella stercorea",
                "strain": "strain=DSM 18206",
                "accession": "GCA_000235885.1",
                "taxid": 363265,
                "species_taxid": 363265,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.4383,
                "matched_fragments": 93,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella albensis",
                "strain": "strain=DSM 11370",
                "accession": "GCA_000426565.1",
                "taxid": 77768,
                "species_taxid": 77768,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0731,
                "matched_fragments": 60,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella albensis",
                "strain": "strain=JCM 12258",
                "accession": "GCA_000613525.1",
                "taxid": 77768,
                "species_taxid": 77768,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0169,
                "matched_fragments": 60,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella hominis",
                "strain": "strain=BCRC 81118",
                "accession": "GCA_004535825.1",
                "taxid": 2518605,
                "species_taxid": 2518605,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3226,
                "matched_fragments": 70,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella baroniae",
                "strain": "strain=JCM 13447",
                "accession": "GCA_000613565.1",
                "taxid": 305719,
                "species_taxid": 305719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0841,
                "matched_fragments": 99,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella baroniae",
                "strain": "strain=DSM 16972",
                "accession": "GCA_000426585.1",
                "taxid": 305719,
                "species_taxid": 305719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0324,
                "matched_fragments": 100,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hallella faecis",
                "strain": "strain=CLA-AA-H145",
                "accession": "GCA_018789675.1",
                "taxid": 2841596,
                "species_taxid": 2841596,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0246,
                "matched_fragments": 126,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella multiformis",
                "strain": "strain=DSM 16608",
                "accession": "GCA_000191065.1",
                "taxid": 282402,
                "species_taxid": 282402,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8598,
                "matched_fragments": 84,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella brevis",
                "strain": "strain=ATCC 19188",
                "accession": "GCA_000621725.1",
                "taxid": 83231,
                "species_taxid": 83231,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8195,
                "matched_fragments": 67,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xylanibacter rodentium",
                "strain": "strain=PROD",
                "accession": "GCA_013166575.1",
                "taxid": 2736289,
                "species_taxid": 2736289,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4135,
                "matched_fragments": 59,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella oris",
                "strain": "strain=DSM 18711",
                "accession": "GCA_000377685.1",
                "taxid": 28135,
                "species_taxid": 28135,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3669,
                "matched_fragments": 63,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella oris",
                "strain": "strain=NCTC13071",
                "accession": "GCA_900637655.1",
                "taxid": 28135,
                "species_taxid": 28135,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3389,
                "matched_fragments": 62,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella maculosa",
                "strain": "strain=JCM 15638",
                "accession": "GCA_000613965.1",
                "taxid": 439703,
                "species_taxid": 439703,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2877,
                "matched_fragments": 54,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella maculosa",
                "strain": "strain=DSM 19339",
                "accession": "GCA_000382385.1",
                "taxid": 439703,
                "species_taxid": 439703,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2711,
                "matched_fragments": 56,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900322035.1",
                "gtdb_species": "s__Prevotella sp900322035",
                "ani": 97.7057,
                "matched_fragments": 715,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.07",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900322095.1",
                "gtdb_species": "s__Prevotella sp900322095",
                "ani": 82.7482,
                "matched_fragments": 524,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.50",
                "min_intra_species_ani": "99.22",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_004558865.1",
                "gtdb_species": "s__Prevotella sp004558865",
                "ani": 82.167,
                "matched_fragments": 361,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900770845.1",
                "gtdb_species": "s__Prevotella sp900770845",
                "ani": 81.6517,
                "matched_fragments": 377,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009695775.1",
                "gtdb_species": "s__Prevotella mizrahii",
                "ani": 81.5715,
                "matched_fragments": 210,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.15",
                "min_intra_species_ani": "96.87",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_900317685.1",
                "gtdb_species": "s__Prevotella sp900317685",
                "ani": 79.3054,
                "matched_fragments": 196,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.13",
                "min_intra_species_ani": "96.10",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_002437285.1",
                "gtdb_species": "s__Prevotella sp002437285",
                "ani": 77.2669,
                "matched_fragments": 120,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.68",
                "min_intra_species_ani": "99.38",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 13,
                "status": "-"
            },
            {
                "accession": "GCF_009495355.1",
                "gtdb_species": "s__Prevotella sp900313215",
                "ani": 77.1664,
                "matched_fragments": 95,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.34",
                "min_intra_species_ani": "96.92",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 15,
                "status": "-"
            },
            {
                "accession": "GCA_000431975.1",
                "gtdb_species": "s__Prevotella sp000431975",
                "ani": 77.0512,
                "matched_fragments": 91,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.89",
                "min_intra_species_ani": "99.89",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_018789675.1",
                "gtdb_species": "s__Prevotella sp002300055",
                "ani": 77.0246,
                "matched_fragments": 126,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.15",
                "min_intra_species_ani": "99.02",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCF_000621725.1",
                "gtdb_species": "s__Prevotella brevis",
                "ani": 76.7871,
                "matched_fragments": 68,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.58",
                "min_intra_species_ani": "97.58",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900110085.1",
                "gtdb_species": "s__Prevotella sp900110085",
                "ani": 76.7499,
                "matched_fragments": 65,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.96",
                "min_intra_species_ani": "96.96",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900318915.1",
                "gtdb_species": "s__Prevotella sp900318915",
                "ani": 76.7388,
                "matched_fragments": 110,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.05",
                "min_intra_species_ani": "95.26",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 11,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.226,
        "cell_length": 0.114,
        "doubling_h": null,
        "growth_tmp": 36.755,
        "optimum_tmp": 35.219,
        "optimum_ph": 7.109,
        "genome_size": 3037444.691,
        "gc_content": 45.137,
        "coding_genes": 2508.172,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 50.875,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.975,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.025,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella sp900322035"
    ],
    "_genome_taxon": [
        "uncultured",
        "Prevotella",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella sp900322035",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "Prevotella",
        "Prevotella",
        "sp900322035"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}