{ "type": "genome", "identifier": "GCA_946413375.1", "organism": "uncultured Bacteroidales bacterium", "title": "uncultured Bacteroidales bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "EMG", "publication": [ {} ], "properties": { "assembly_accession": "GCA_946413375.1", "bioproject": "PRJEB54748", "biosample": "SAMEA110643228", "wgs_master": "CAMKKI000000000.1", "refseq_category": "na", "taxid": "194843", "species_taxid": "194843", "organism_name": "uncultured Bacteroidales bacterium", "infraspecific_name": "", "isolate": "SRR12081294_bin.14_metaWRAP_v1.3_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/09/12", "asm_name": "SRR12081294_bin.14_metaWRAP_v1.3_MAG", "submitter": "EMG", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/946/413/375/GCA_946413375.1_SRR12081294_bin.14_metaWRAP_v1.3_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-09-12", "dateModified": "2022-09-12", "datePublished": "2022-09-12", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Bacteroidales bacterium" ], "sample_taxid": [ "194843" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "0.743 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 89.58, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2645993", "Number of Sequences": "79", "Longest Sequences (bp)": "258222", "N50 (bp)": "59254", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "62.0", "Number of CDSs": "2066", "Average Protein Length": "383.0", "Coding Ratio (%)": "89.7", "Number of rRNAs": "0", "Number of tRNAs": "37", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Alistipes megaguti", "strain": "strain=Marseille-P5997", "accession": "GCA_900604385.1", "taxid": 2364787, "species_taxid": 2364787, "relation_to_type": "type", "validated": true, "ani": 76.4294, "matched_fragments": 67, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alistipes shahii", "strain": "strain=WAL 8301", "accession": "GCA_025145845.1", "taxid": 328814, "species_taxid": 328814, "relation_to_type": "suspected-type", "validated": true, "ani": 76.3765, "matched_fragments": 82, 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"below_threshold" }, { "organism_name": "Alistipes timonensis", "strain": "strain=DSM 25383", "accession": "GCA_900107675.1", "taxid": 1465754, "species_taxid": 1465754, "relation_to_type": "type", "validated": true, "ani": 76.096, "matched_fragments": 65, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alistipes communis", "strain": "strain=5CBH24", "accession": "GCA_006542665.1", "taxid": 2585118, "species_taxid": 2585118, "relation_to_type": "type", "validated": true, "ani": 76.0872, "matched_fragments": 53, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corallococcus interemptor", "strain": "strain=AB047A", "accession": "GCA_003668875.1", "taxid": 2316720, "species_taxid": 2316720, "relation_to_type": "type", "validated": true, "ani": 74.8782, "matched_fragments": 57, "total_fragments": 839, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corallococcus 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