{
    "type": "genome",
    "identifier": "GCA_946539445.1",
    "organism": "uncultured Bacillales bacterium",
    "title": "uncultured Bacillales bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMBL-EBI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_946539445.1",
        "bioproject": "PRJEB22623",
        "biosample": "SAMEA110744779",
        "wgs_master": "CAMNHK000000000.1",
        "refseq_category": "na",
        "taxid": "157472",
        "species_taxid": "157472",
        "organism_name": "uncultured Bacillales bacterium",
        "infraspecific_name": "",
        "isolate": "SRR873596_bin.89_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/13",
        "asm_name": "SRR873596_bin.89_metaWRAP_v1.3_MAG",
        "submitter": "EMBL-EBI",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/946/539/445/GCA_946539445.1_SRR873596_bin.89_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-13",
    "dateModified": "2022-09-13",
    "datePublished": "2022-09-13",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Bacillales bacterium"
        ],
        "sample_taxid": [
            "157472"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "New Zealand"
        ],
        "sample_host_location_id": [],
        "data_size": "0.380 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 75.06,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1365479",
        "Number of Sequences": "46",
        "Longest Sequences (bp)": "117441",
        "N50 (bp)": "43472",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.1",
        "Number of CDSs": "1308",
        "Average Protein Length": "314.4",
        "Coding Ratio (%)": "90.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "17",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 75.06,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_902780395.1",
                "gtdb_species": "s__UBA3789 sp902780395",
                "ani": 78.8777,
                "matched_fragments": 176,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902782835.1",
                "gtdb_species": "s__UBA3789 sp902782835",
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                "matched_fragments": 152,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902780585.1",
                "gtdb_species": "s__UBA3789 sp902780585",
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                "matched_fragments": 141,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.24",
                "min_intra_species_ani": "98.24",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002369415.1",
                "gtdb_species": "s__UBA3789 sp002369415",
                "ani": 78.2591,
                "matched_fragments": 135,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902797265.1",
                "gtdb_species": "s__UBA3789 sp902797265",
                "ani": 78.2526,
                "matched_fragments": 143,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017432645.1",
                "gtdb_species": "s__UBA3789 sp017432645",
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                "matched_fragments": 109,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017432665.1",
                "gtdb_species": "s__UBA3789 sp017432665",
                "ani": 78.2143,
                "matched_fragments": 105,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017964405.1",
                "gtdb_species": "s__UBA3789 sp017964405",
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                "matched_fragments": 147,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017405445.1",
                "gtdb_species": "s__UBA3789 sp017405445",
                "ani": 78.0917,
                "matched_fragments": 159,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017541885.1",
                "gtdb_species": "s__UBA3789 sp017541885",
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                "matched_fragments": 159,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017511375.1",
                "gtdb_species": "s__UBA3789 sp017511375",
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                "matched_fragments": 126,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_902783435.1",
                "gtdb_species": "s__UBA3789 sp902783435",
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                "matched_fragments": 143,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__UBA3789",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_902796215.1",
                "gtdb_species": "s__UBA3789 sp902796215",
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                "matched_fragments": 120,
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_017511605.1",
                "gtdb_species": "s__UBA3789 sp017511605",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_902783315.1",
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            },
            {
                "accession": "GCA_902767005.1",
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                "ani": 77.0878,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__RUG11224",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.2,
        "cell_length": 0.374,
        "doubling_h": -0.049,
        "growth_tmp": 33.597,
        "optimum_tmp": 35.73,
        "optimum_ph": 7.419,
        "genome_size": 4176053.049,
        "gc_content": 43.446,
        "coding_genes": 3725.899,
        "rRNA16S_genes": 8.592,
        "tRNA_genes": 79.569,
        "gram_stain": 0.991,
        "sporulation": 0.824,
        "motility": 0.753,
        "range_salinity": 0.675,
        "facultative_respiration": 0.19,
        "anaerobic_respiration": 0.031,
        "aerobic_respiration": 0.778,
        "mesophilic_range_tmp": 0.762,
        "thermophilic_range_tmp": 0.189,
        "psychrophilic_range_tmp": 0.048,
        "bacillus_cell_shape": 0.871,
        "coccus_cell_shape": 0.123,
        "filament_cell_shape": 0.001,
        "coccobacillus_cell_shape": 0.003,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__RF39",
        "f__UBA660",
        "g__UBA3789",
        "s__UBA3789 sp946539445"
    ],
    "_genome_taxon": [
        "uncultured",
        "Bacillales",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__RF39",
        "f__UBA660",
        "g__UBA3789",
        "s__UBA3789 sp946539445",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
        "A",
        "RF39",
        "UBA660",
        "UBA3789",
        "UBA3789",
        "sp946539445"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}