{
    "type": "genome",
    "identifier": "GCA_946621175.1",
    "organism": "uncultured Clostridia bacterium",
    "title": "uncultured Clostridia bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMBL-EBI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_946621175.1",
        "bioproject": "PRJEB22623",
        "biosample": "SAMEA110746209",
        "wgs_master": "CAMOOJ000000000.1",
        "refseq_category": "na",
        "taxid": "244328",
        "species_taxid": "244328",
        "organism_name": "uncultured Clostridia bacterium",
        "infraspecific_name": "",
        "isolate": "SRR873609_bin.119_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/13",
        "asm_name": "SRR873609_bin.119_metaWRAP_v1.3_MAG",
        "submitter": "EMBL-EBI",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/946/621/175/GCA_946621175.1_SRR873609_bin.119_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-13",
    "dateModified": "2022-09-13",
    "datePublished": "2022-09-13",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Clostridia bacterium"
        ],
        "sample_taxid": [
            "244328"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "New Zealand"
        ],
        "sample_host_location_id": [],
        "data_size": "0.486 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 42.89,
        "contamination": 11.46,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1697167",
        "Number of Sequences": "300",
        "Longest Sequences (bp)": "27630",
        "N50 (bp)": "6248",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "57.4",
        "Number of CDSs": "1255",
        "Average Protein Length": "313.4",
        "Coding Ratio (%)": "69.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "12",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 42.89,
            "contamination": 11.46,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_902798545.1",
                "gtdb_species": "s__Limivicinus sp902798545",
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                "total_fragments": 413,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017458335.1",
                "gtdb_species": "s__Limivicinus sp017458335",
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                "matched_fragments": 136,
                "total_fragments": 413,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017627975.1",
                "gtdb_species": "s__Limivicinus sp017627975",
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                "matched_fragments": 110,
                "total_fragments": 413,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902789835.1",
                "gtdb_species": "s__Limivicinus sp902789835",
                "ani": 78.6756,
                "matched_fragments": 119,
                "total_fragments": 413,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017458065.1",
                "gtdb_species": "s__Limivicinus sp017458065",
                "ani": 78.3232,
                "matched_fragments": 131,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017538965.1",
                "gtdb_species": "s__Limivicinus sp017538965",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900319635.1",
                "gtdb_species": "s__Limivicinus sp900319635",
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                "matched_fragments": 54,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.84",
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                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_902775985.1",
                "gtdb_species": "s__Limivicinus sp902775985",
                "ani": 77.1753,
                "matched_fragments": 68,
                "total_fragments": 413,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.70",
                "min_intra_species_ani": "98.45",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 5,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Oscillospiraceae",
        "g__Limivicinus",
        "s__"
    ],
    "_genome_taxon": [
        "uncultured",
        "Clostridia",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Oscillospiraceae",
        "g__Limivicinus",
        "s__",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Oscillospiraceae",
        "Limivicinus",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 1,
    "quality_label": "\u2b50\ufe0f"
}