{
    "type": "genome",
    "identifier": "GCA_947072425.1",
    "organism": "Obesumbacterium proteus",
    "title": "Obesumbacterium proteus",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947072425.1",
        "bioproject": "PRJEB56417",
        "biosample": "SAMEA111477187",
        "wgs_master": "CAMTHT000000000.1",
        "refseq_category": "na",
        "taxid": "82983",
        "species_taxid": "82983",
        "organism_name": "Obesumbacterium proteus",
        "infraspecific_name": "",
        "isolate": "ERR5094894_bin.3_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/10/18",
        "asm_name": "ERR5094894_bin.3_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "GCF_947072425.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/072/425/GCA_947072425.1_ERR5094894_bin.3_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-10-18",
    "dateModified": "2022-10-18",
    "datePublished": "2022-10-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Obesumbacterium proteus"
        ],
        "sample_taxid": [
            "82983"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Poland"
        ],
        "sample_host_location_id": [],
        "data_size": "1.212 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 83.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4213089",
        "Number of Sequences": "212",
        "Longest Sequences (bp)": "283097",
        "N50 (bp)": "30421",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.1",
        "Number of CDSs": "3717",
        "Average Protein Length": "312.6",
        "Coding Ratio (%)": "82.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Obesumbacterium proteus",
                "strain": "strain=DSM 2777",
                "accession": "GCA_001586165.1",
                "taxid": 82983,
                "species_taxid": 82983,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.9427,
                "matched_fragments": 1229,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Obesumbacterium proteus",
                "strain": "strain=ATCC 12841",
                "accession": "GCA_001655035.1",
                "taxid": 82983,
                "species_taxid": 82983,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.9021,
                "matched_fragments": 1227,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Hafnia alvei",
                "strain": "strain=ATCC 13337",
                "accession": "GCA_003668715.1",
                "taxid": 569,
                "species_taxid": 569,
                "relation_to_type": "type",
                "validated": true,
                "ani": 94.5244,
                "matched_fragments": 1157,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hafnia alvei",
                "strain": "strain=ATCC 13337",
                "accession": "GCA_000735375.1",
                "taxid": 569,
                "species_taxid": 569,
                "relation_to_type": "type",
                "validated": true,
                "ani": 94.5173,
                "matched_fragments": 1145,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hafnia paralvei",
                "strain": "strain=ATCC 29927",
                "accession": "GCA_001655005.1",
                "taxid": 546367,
                "species_taxid": 546367,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.2239,
                "matched_fragments": 952,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hafnia paralvei",
                "strain": "strain=ATCC 29927",
                "accession": "GCA_023698525.1",
                "taxid": 546367,
                "species_taxid": 546367,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.1832,
                "matched_fragments": 950,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rahnella ecdela",
                "strain": "strain=FRB 231",
                "accession": "GCA_019049625.1",
                "taxid": 2816250,
                "species_taxid": 2816250,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4921,
                "matched_fragments": 303,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rahnella bonaserana",
                "strain": "strain=H11b",
                "accession": "GCA_019049675.1",
                "taxid": 2816248,
                "species_taxid": 2816248,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3437,
                "matched_fragments": 309,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serratia entomophila",
                "strain": "strain=A1",
                "accession": "GCA_021462285.1",
                "taxid": 42906,
                "species_taxid": 42906,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.32,
                "matched_fragments": 317,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serratia nevei",
                "strain": "strain=S15",
                "accession": "GCA_008364245.1",
                "taxid": 2703794,
                "species_taxid": 2703794,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3092,
                "matched_fragments": 308,
                "total_fragments": 1303,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 83.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001586165.1",
                "gtdb_species": "s__Hafnia proteus",
                "ani": 97.9427,
                "matched_fragments": 1229,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Hafnia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.09",
                "min_intra_species_ani": "96.49",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000735375.1",
                "gtdb_species": "s__Hafnia alvei",
                "ani": 94.5173,
                "matched_fragments": 1145,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Hafnia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.59",
                "min_intra_species_ani": "95.60",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 31,
                "status": "-"
            },
            {
                "accession": "GCF_900095695.1",
                "gtdb_species": "s__Hafnia alvei_B",
                "ani": 92.954,
                "matched_fragments": 1170,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Hafnia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_001655005.1",
                "gtdb_species": "s__Hafnia paralvei",
                "ani": 84.23,
                "matched_fragments": 951,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Hafnia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.49",
                "min_intra_species_ani": "95.65",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 34,
                "status": "-"
            },
            {
                "accession": "GCF_001976145.1",
                "gtdb_species": "s__Chania oryzae",
                "ani": 78.3531,
                "matched_fragments": 343,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Chania",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.90",
                "min_intra_species_ani": "98.79",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_014189855.1",
                "gtdb_species": "s__Buttiauxella sp014189855",
                "ani": 78.329,
                "matched_fragments": 280,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Buttiauxella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003363015.1",
                "gtdb_species": "s__Enterobacillus tribolii",
                "ani": 78.2853,
                "matched_fragments": 400,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000633355.1",
                "gtdb_species": "s__Serratia_A sp000633355",
                "ani": 78.183,
                "matched_fragments": 362,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Serratia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000496755.2",
                "gtdb_species": "s__Serratia_A sp000496755",
                "ani": 78.1223,
                "matched_fragments": 184,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Serratia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001267535.1",
                "gtdb_species": "s__Erwinia iniecta",
                "ani": 77.832,
                "matched_fragments": 256,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Erwinia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.95",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_013394855.1",
                "gtdb_species": "s__Limnobaculum xujianqingii",
                "ani": 77.3222,
                "matched_fragments": 165,
                "total_fragments": 1303,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Limnobaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.42",
                "min_intra_species_ani": "97.65",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 30.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 5011797.0,
        "gc_content": 49.1,
        "coding_genes": 4453.0,
        "rRNA16S_genes": 8.0,
        "tRNA_genes": 89.0,
        "gram_stain": 0.0,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Enterobacterales",
        "f__Enterobacteriaceae",
        "g__Hafnia",
        "s__Hafnia protea"
    ],
    "_genome_taxon": [
        "Obesumbacterium",
        "proteus",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Enterobacterales",
        "f__Enterobacteriaceae",
        "g__Hafnia",
        "s__Hafnia protea",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Enterobacterales",
        "Enterobacteriaceae",
        "Hafnia",
        "Hafnia",
        "protea"
    ],
    "_meo": [
        {
            "id": "MEO_0000468",
            "label": "gut"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}