{ "type": "genome", "identifier": "GCA_947072535.1", "organism": "Lactobacillus johnsonii", "title": "Lactobacillus johnsonii", "description": "derived from metagenome; genome length too small", "data type": "Genome sequencing and assembly", "organization": "EMG", "publication": [ {} ], "properties": { "assembly_accession": "GCA_947072535.1", "bioproject": "PRJEB56417", "biosample": "SAMEA111477161", "wgs_master": "CAMTIJ000000000.1", "refseq_category": "na", "taxid": "33959", "species_taxid": "33959", "organism_name": "Lactobacillus johnsonii", "infraspecific_name": "", "isolate": "ERR5094867_bin.3_metaWRAP_v1.3_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/10/17", "asm_name": "ERR5094867_bin.3_metaWRAP_v1.3_MAG", "submitter": "EMG", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/072/535/GCA_947072535.1_ERR5094867_bin.3_metaWRAP_v1.3_MAG", "excluded_from_refseq": "derived from metagenome; genome length too small", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-10-17", "dateModified": "2022-10-17", "datePublished": "2022-10-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Lactobacillus johnsonii" ], "sample_taxid": [ "33959" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Spain" ], "sample_host_location_id": [], "data_size": "0.365 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 37.5, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": 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"Lactobacillus rodentium", "strain": "strain=DSM 24759", "accession": "GCA_024622425.1", "taxid": 947835, "species_taxid": 947835, "relation_to_type": "type", "validated": true, "ani": 78.5126, "matched_fragments": 96, "total_fragments": 360, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lactobacillus intestinalis", "strain": "strain=DSM 6629", "accession": "GCA_024397795.1", "taxid": 151781, "species_taxid": 151781, "relation_to_type": "type", "validated": true, "ani": 78.3933, "matched_fragments": 94, "total_fragments": 360, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lactobacillus colini", "strain": "strain=DSM 101872", "accession": "GCA_017874575.1", "taxid": 1819254, "species_taxid": 1819254, "relation_to_type": "type", "validated": true, "ani": 78.3408, "matched_fragments": 103, "total_fragments": 360, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 37.5, "contamination": 0.0, 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