{
    "type": "genome",
    "identifier": "GCA_947072595.1",
    "organism": "uncultured Deefgea sp.",
    "title": "uncultured Deefgea sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947072595.1",
        "bioproject": "PRJEB56417",
        "biosample": "SAMEA111477207",
        "wgs_master": "CAMTIU000000000.1",
        "refseq_category": "na",
        "taxid": "1304914",
        "species_taxid": "1304914",
        "organism_name": "uncultured Deefgea sp.",
        "infraspecific_name": "",
        "isolate": "ERR5094905_bin.3_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/10/18",
        "asm_name": "ERR5094905_bin.3_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/072/595/GCA_947072595.1_ERR5094905_bin.3_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-10-18",
    "dateModified": "2022-10-18",
    "datePublished": "2022-10-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Deefgea sp."
        ],
        "sample_taxid": [
            "1304914"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Poland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.940 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3295361",
        "Number of Sequences": "188",
        "Longest Sequences (bp)": "114508",
        "N50 (bp)": "45223",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.6",
        "Number of CDSs": "2858",
        "Average Protein Length": "315.2",
        "Coding Ratio (%)": "82.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Deefgea salmonis",
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                "accession": "GCA_020531905.1",
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                "species_taxid": 2875502,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.8096,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Deefgea rivuli",
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                "accession": "GCA_000620145.1",
                "taxid": 400948,
                "species_taxid": 400948,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.3848,
                "matched_fragments": 548,
                "total_fragments": 1006,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deefgea chitinilytica",
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                "accession": "GCA_016881405.1",
                "taxid": 570276,
                "species_taxid": 570276,
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                "validated": true,
                "ani": 79.7756,
                "matched_fragments": 451,
                "total_fragments": 1006,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chitinibacter bivalviorum",
                "strain": "strain=2T18",
                "accession": "GCA_013403565.1",
                "taxid": 2739434,
                "species_taxid": 2739434,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 297,
                "total_fragments": 1006,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chitinibacter fontanus",
                "strain": "strain=STM-7",
                "accession": "GCA_013423785.1",
                "taxid": 1737446,
                "species_taxid": 1737446,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9618,
                "matched_fragments": 272,
                "total_fragments": 1006,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Iodobacter ciconiae",
                "strain": "strain=H11R3",
                "accession": "GCA_003952345.1",
                "taxid": 2496266,
                "species_taxid": 2496266,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3535,
                "matched_fragments": 118,
                "total_fragments": 1006,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chitinibacter tainanensis",
                "strain": "strain=DSM 15459",
                "accession": "GCA_000429785.1",
                "taxid": 230667,
                "species_taxid": 230667,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.316,
                "matched_fragments": 221,
                "total_fragments": 1006,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Iodobacter fluviatilis",
                "strain": "strain=DSM 3764",
                "accession": "GCA_004346505.1",
                "taxid": 537,
                "species_taxid": 537,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9364,
                "matched_fragments": 145,
                "total_fragments": 1006,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Iodobacter fluviatilis",
                "strain": "strain=NCTC11159",
                "accession": "GCA_900451195.1",
                "taxid": 537,
                "species_taxid": 537,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9013,
                "matched_fragments": 147,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCF_013284055.1",
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                "total_fragments": 1006,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chitinibacteraceae;g__Deefgea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.22",
                "min_intra_species_ani": "95.22",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000620145.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chitinibacteraceae;g__Deefgea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_016881405.1",
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                "matched_fragments": 452,
                "total_fragments": 1006,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chitinibacteraceae;g__Deefgea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
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            },
            {
                "accession": "GCF_013403565.1",
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                "matched_fragments": 296,
                "total_fragments": 1006,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chitinibacteraceae;g__Chitinibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_013423785.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009760905.1",
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                "matched_fragments": 268,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chitinibacteraceae;g__Chitinibacter",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_000429785.1",
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            },
            {
                "accession": "GCF_011601265.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_002735645.1",
                "gtdb_species": "s__Iodobacter sp002735645",
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                "matched_fragments": 152,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chitinibacteraceae;g__Iodobacter",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.133,
        "cell_length": 0.414,
        "doubling_h": null,
        "growth_tmp": 27.5,
        "optimum_tmp": 26.5,
        "optimum_ph": 7.225,
        "genome_size": 3713920.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": null,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.5,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.5,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Chitinibacteraceae",
        "g__Deefgea",
        "s__Deefgea salmonis"
    ],
    "_genome_taxon": [
        "uncultured",
        "Deefgea",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Chitinibacteraceae",
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        "s__Deefgea salmonis",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Chitinibacteraceae",
        "Deefgea",
        "Deefgea",
        "salmonis"
    ],
    "_meo": [
        {
            "id": "MEO_0000468",
            "label": "gut"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}