{
    "type": "genome",
    "identifier": "GCA_947073665.1",
    "organism": "Faecalibaculum rodentium",
    "title": "Faecalibaculum rodentium",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947073665.1",
        "bioproject": "PRJEB56086",
        "biosample": "SAMEA111477336",
        "wgs_master": "CAMTMS000000000.1",
        "refseq_category": "na",
        "taxid": "1702221",
        "species_taxid": "1702221",
        "organism_name": "Faecalibaculum rodentium",
        "infraspecific_name": "",
        "isolate": "SRR12464005_bin.23_metawrap_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/10/18",
        "asm_name": "SRR12464005_bin.23_metawrap_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "GCF_947073665.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/073/665/GCA_947073665.1_SRR12464005_bin.23_metawrap_v1.3_MAG",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-10-18",
    "dateModified": "2022-10-18",
    "datePublished": "2022-10-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Faecalibaculum rodentium"
        ],
        "sample_taxid": [
            "1702221"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.692 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 99.54,
        "contamination": 2.08,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2427870",
        "Number of Sequences": "82",
        "Longest Sequences (bp)": "124757",
        "N50 (bp)": "48604",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.9",
        "Number of CDSs": "2357",
        "Average Protein Length": "296.2",
        "Coding Ratio (%)": "86.3",
        "Number of rRNAs": "3",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Faecalibaculum rodentium",
                "strain": "strain=ALO17",
                "accession": "GCA_001564455.1",
                "taxid": 1702221,
                "species_taxid": 1702221,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.8544,
                "matched_fragments": 695,
                "total_fragments": 766,
                "ani_threshold": 95,
                "status": "conclusive"
            }
        ],
        "cc_result": {
            "completeness": 99.54,
            "contamination": 2.08,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001564455.1",
                "gtdb_species": "s__Faecalibaculum rodentium",
                "ani": 97.8544,
                "matched_fragments": 695,
                "total_fragments": 766,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Faecalibaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.78",
                "min_intra_species_ani": "97.75",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_910588395.1",
                "gtdb_species": "s__Faecalibaculum sp910588395",
                "ani": 82.0286,
                "matched_fragments": 458,
                "total_fragments": 766,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Faecalibaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 2542487.333,
        "gc_content": 54.0,
        "coding_genes": 2573.0,
        "rRNA16S_genes": 14.0,
        "tRNA_genes": 55.0,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Erysipelotrichaceae",
        "g__Faecalibaculum",
        "s__Faecalibaculum rodentium"
    ],
    "_genome_taxon": [
        "Faecalibaculum",
        "rodentium",
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Erysipelotrichaceae",
        "g__Faecalibaculum",
        "s__Faecalibaculum rodentium",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
        "A",
        "Erysipelotrichales",
        "Erysipelotrichaceae",
        "Faecalibaculum",
        "Faecalibaculum",
        "rodentium"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}