{
    "type": "genome",
    "identifier": "GCA_947074335.1",
    "organism": "uncultured Parabacteroides sp.",
    "title": "uncultured Parabacteroides sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947074335.1",
        "bioproject": "PRJEB56304",
        "biosample": "SAMEA111477444",
        "wgs_master": "CAMTPG000000000.1",
        "refseq_category": "na",
        "taxid": "512312",
        "species_taxid": "512312",
        "organism_name": "uncultured Parabacteroides sp.",
        "infraspecific_name": "",
        "isolate": "SRR7610133_bin.1_metaWRAP_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/10/18",
        "asm_name": "SRR7610133_bin.1_metaWRAP_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/074/335/GCA_947074335.1_SRR7610133_bin.1_metaWRAP_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-10-18",
    "dateModified": "2022-10-18",
    "datePublished": "2022-10-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Parabacteroides sp."
        ],
        "sample_taxid": [
            "512312"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil"
        ],
        "sample_host_location_id": [],
        "data_size": "0.782 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 66.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2741727",
        "Number of Sequences": "412",
        "Longest Sequences (bp)": "32395",
        "N50 (bp)": "8002",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.4",
        "Number of CDSs": "1820",
        "Average Protein Length": "363.2",
        "Coding Ratio (%)": "72.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Parabacteroides timonensis",
                "strain": "strain=Marseille-P3236",
                "accession": "GCA_900128505.1",
                "taxid": 1871013,
                "species_taxid": 1871013,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7673,
                "matched_fragments": 137,
                "total_fragments": 718,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Parabacteroides johnsonii",
                "strain": "strain=DSM 18315",
                "accession": "GCA_025151045.1",
                "taxid": 387661,
                "species_taxid": 387661,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6925,
                "matched_fragments": 126,
                "total_fragments": 718,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Parabacteroides johnsonii",
                "strain": "strain=DSM 18315",
                "accession": "GCA_000156495.1",
                "taxid": 387661,
                "species_taxid": 387661,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6642,
                "matched_fragments": 123,
                "total_fragments": 718,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Parabacteroides acidifaciens",
                "strain": "strain=426-9",
                "accession": "GCA_003363715.1",
                "taxid": 2290935,
                "species_taxid": 2290935,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6159,
                "matched_fragments": 147,
                "total_fragments": 718,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Parabacteroides acidifaciens",
                "strain": "strain=426_9",
                "accession": "GCA_014385205.1",
                "taxid": 2290935,
                "species_taxid": 2290935,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5939,
                "matched_fragments": 148,
                "total_fragments": 718,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Parabacteroides merdae",
                "strain": "strain=ATCC 43184",
                "accession": "GCA_000154105.1",
                "taxid": 46503,
                "species_taxid": 46503,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.494,
                "matched_fragments": 134,
                "total_fragments": 718,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Parabacteroides merdae",
                "strain": "strain=ATCC 43184",
                "accession": "GCA_025151215.1",
                "taxid": 46503,
                "species_taxid": 46503,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4836,
                "matched_fragments": 131,
                "total_fragments": 718,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Parabacteroides merdae",
                "strain": "strain=NCTC13052",
                "accession": "GCA_900445495.1",
                "taxid": 46503,
                "species_taxid": 46503,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4663,
                "matched_fragments": 134,
                "total_fragments": 718,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 66.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000156495.1",
                "gtdb_species": "s__Parabacteroides johnsonii",
                "ani": 77.6642,
                "matched_fragments": 123,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.42",
                "min_intra_species_ani": "96.67",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 13,
                "status": "-"
            },
            {
                "accession": "GCF_003363715.1",
                "gtdb_species": "s__Parabacteroides acidifaciens",
                "ani": 77.6159,
                "matched_fragments": 147,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.21",
                "min_intra_species_ani": "97.25",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_000154105.1",
                "gtdb_species": "s__Parabacteroides merdae",
                "ani": 77.494,
                "matched_fragments": 134,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.97",
                "min_intra_species_ani": "97.44",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 85,
                "status": "-"
            },
            {
                "accession": "GCA_900552465.1",
                "gtdb_species": "s__Parabacteroides sp900552465",
                "ani": 77.4429,
                "matched_fragments": 122,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.92",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_014647375.1",
                "gtdb_species": "s__Parabacteroides faecis",
                "ani": 77.3924,
                "matched_fragments": 141,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.52",
                "min_intra_species_ani": "97.91",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCF_003473295.1",
                "gtdb_species": "s__Parabacteroides sp003473295",
                "ani": 77.3922,
                "matched_fragments": 129,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900155425.1",
                "gtdb_species": "s__Parabacteroides massiliensis",
                "ani": 77.3615,
                "matched_fragments": 134,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.33",
                "min_intra_species_ani": "99.33",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900108035.1",
                "gtdb_species": "s__Parabacteroides chinchillae",
                "ani": 77.338,
                "matched_fragments": 90,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.95",
                "min_intra_species_ani": "97.95",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900760525.1",
                "gtdb_species": "s__Parabacteroides sp900760525",
                "ani": 77.306,
                "matched_fragments": 135,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.93",
                "min_intra_species_ani": "98.92",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_014287585.1",
                "gtdb_species": "s__Parabacteroides sp014287585",
                "ani": 77.2819,
                "matched_fragments": 151,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.33",
                "min_intra_species_ani": "98.97",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900541965.1",
                "gtdb_species": "s__Parabacteroides sp900541965",
                "ani": 77.2228,
                "matched_fragments": 133,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002381645.1",
                "gtdb_species": "s__UBA4116 sp002381645",
                "ani": 76.3184,
                "matched_fragments": 53,
                "total_fragments": 718,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__UBA4116",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.047,
        "cell_length": 0.432,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 36.8,
        "optimum_ph": 7.25,
        "genome_size": 5037952.719,
        "gc_content": 44.545,
        "coding_genes": 3853.0,
        "rRNA16S_genes": 7.0,
        "tRNA_genes": 82.0,
        "gram_stain": 0.166,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Tannerellaceae",
        "g__Parabacteroides",
        "s__Parabacteroides sp947074335"
    ],
    "_genome_taxon": [
        "uncultured",
        "Parabacteroides",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Tannerellaceae",
        "g__Parabacteroides",
        "s__Parabacteroides sp947074335",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Tannerellaceae",
        "Parabacteroides",
        "Parabacteroides",
        "sp947074335"
    ],
    "_meo": [
        {
            "id": "MEO_0000468",
            "label": "gut"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}