SAMEA111491837 ERS13585848 Acutalibacter muris This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14038242 of study SRP313462. EBI Generic Generic.1.0 ERC000047 2022-10-19 2022-10-19 SAMEA111491837 EMG EMG 2022-10-19T12:28:17Z 2022-10-19T12:28:17Z public SRR14038242_bin.39_metawrap_v1.3_MAG Many fragments with little to no review of assembly other than reporting of standard assembly statistics metaSPAdes v3.15.3 MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters. metawrap v1.3 mouse digestive system EMG broker account, EMBL-EBI 2019-10-27 94.19 CheckM 0.58 feces USA 42.723778 -84.4751 metagenome-assembled genome mouse gut metagenome digestive tube mouse gut metagenome Gut dysbiosis commonly associated with the development and progression of non-alcoholic liver disease (NAFLD), is recapitulated in male mice exposed to 2,3,7,8-Tetrachlorodibenzo-p-dioxin (TCDD). To investigate changes in the gut microbiota, male mice (n=3) were orally gavaged with sesame oil vehicle control or 0.3, 3 or 30 ug/kg TCDD every 4 days for 28 days. Shotgun metagenomic sequencing was used to evaluate TCDD-elicited shifts in taxonomy and metabolic pathways associated with and contributing to NAFLD progression. SAMN18426293 SRR14038242_bin.39_metawrap_v1.3_MAG Illumina NovaSeq 6000 The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Acutalibacter;s__Acutalibacter muris multi-marker approach